| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0888 |
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| Symbol | |
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| ID | 8322952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 909086 |
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| End bp | 909967 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952022 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003109506 |
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| Protein GI | 256371682 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC TGACCCGTCG CCCCGAGGCC CAGGTCGGCC CGCGAGCCGT TCGCCGAGAC
GGTGCGCTGG CGCGGTTCCT CGCCAATCGA CTCGCCGTCG GTGCACTGGT GGTGCTGGTG
GCGATCGTCG CGTTCTGCTT CGTCGGTCCG ATCGTGCACC CGGTGTCGGA CGCGGCCAAC
CTGCTGCACG CCAACCAGGC ACCCTCCGGC CAGTATCTGC TCGGCACGAC ACCGAACGGC
CGTGACGTCC TCGGACGTCT CATGGTGGGA GGCCAGTCGA CGCTCGAGCT CGGGGTGGCC
GTTGGCGTGC TCGCGACAGG CTTCGGCCTG CTCTATGGCA CCGTCGCCGG TCTGGTGGGT
GGTGTCACGG ACGCGATCTT GATGCGCATC GTCGATGCGC TGCTCTCGAT CCCGTTCCTC
TTCTTCGTCA TCTTGCTCGC CTCGATCGTG CGCCCGACGC TCGGACTCAT CATCCTCGTG
ATCGCCGGCG TGAGCTGGCT CTCGACGGCG AGGCTCGTCC GAGCCGAGAC CCTCAGGCTC
CGAACCCTCG ACTACGTCGA CGCTGCCCGT GGTTTCGGAG CTCCCCCCTG GTGGATCCTC
GTGCGCCACC TCGTGCCCAA CGTGCTCGGT GTGCTCGTCG TGAACGGGAC CTTGAAGGTC
GCCGATGCGA TCCTCACCTT TGCGGCGCTC GGCTACCTCG GCCTCGGCGT GCCCCCGCCC
GCGACGAACT GGGGCGCGTT GCTCTCGGCG GGCGTGAACA ACTTCTTCGA CGGCTACTGG
TGGCAGCTGT GGCCAGCGGC CGTGCTCATC GTCGTCACCG TGCTCGCGGT GAACGTGCTC
GGCGACGCCC TGCGCGACGT CGTGGAGCGG AGGCTCTCGT GA
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| Protein sequence | MTTLTRRPEA QVGPRAVRRD GALARFLANR LAVGALVVLV AIVAFCFVGP IVHPVSDAAN
LLHANQAPSG QYLLGTTPNG RDVLGRLMVG GQSTLELGVA VGVLATGFGL LYGTVAGLVG
GVTDAILMRI VDALLSIPFL FFVILLASIV RPTLGLIILV IAGVSWLSTA RLVRAETLRL
RTLDYVDAAR GFGAPPWWIL VRHLVPNVLG VLVVNGTLKV ADAILTFAAL GYLGLGVPPP
ATNWGALLSA GVNNFFDGYW WQLWPAAVLI VVTVLAVNVL GDALRDVVER RLS
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