Gene Afer_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0881 
Symbol 
ID8322945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp902107 
End bp903138 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content73% 
IMG OID644952015 
Producthypothetical protein 
Protein accessionYP_003109499 
Protein GI256371675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3075] Anaerobic glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTCG TGGTCGTCGG GGCAGGGCCG AGCGGGCTCC TCGCGGCGTC GCTGCTGCTG 
GACGAGGGTG CGTCGCCGAT CGTCGTCGCG GCCGGCGAGG GTTCTCTTGG CTTGTGGCCG
GGTTGGCTCG CGGCCCCACG GGACGATGGC GCCGTCGAGC GGGCCGTCGC GAGCTTGAAT
CGGGCCGACG CACGACTGTC GAGCGTCGAC GAGCGCGACC GACTCATCGG CCCGCTCGGG
GTCGCGCATC GGTTCGCCTG GGCTCCGCCG GAACTCGCGA GAGTGGGACC CGAGGACGTC
GTCGGCTTCT GCGGCTTCGC CGAGATGACC GAGACGCGGG CTGCCGTCGC GGTGGCGACC
TGGCAGAGCC AGACCGGATC GGCAGCCGTC GGCTTCGACC TCGCGCCGTG GGGCCGGCGG
GTGCCGTTCG AACTCGCTCG CTTCCTCGGG CACCTGGAGG GGGCGCGAGC GCTCGGGCGC
GCCCTCGCGC CCCGGGTCGA CGGCGCCGTG AGCGTCGTCG CGGTACCGGG ACTGCTCGGT
ATCGAGGATG CGACCCGGGC GCTGGCGGTG CTCGAGGAGA TGCTCGAGCG CCGGGTCGGC
GAGGTACCGC TCGTCACGCC TGCCCTGGCT GGTTGGCGGC TCGATCGTCG GGTGCGCACC
GCACTTGCGG CTCGGGGCGC GACCTTTCGG CGCGCCAGGG TCGTCGAGGT CGGTCGGGGA
GGCGTACGGC TCGCGGACGG TGCGCACGTC GACGCCGACG CGGTCGTGCT CGCCACTGGG
GGCGTTGCGG GTGGCGGCAT CGCAATCGGT CCGGATGGCT CGCTCACAGA TAGCGCGCGC
GGCGTCGCGA TCGGCGACCC TGCGGCATGG ATGATGGGAG AAGACGTGGG GCTGCTCGGT
TATCGCGAGG TCGTCGTCGA CGAGGAGGCT CGGGTCGTCG CGGTGGGCGC GCTCCGTGCG
CACGAAGGCT CCGGGTTCGC CCAGGTTGCC CAGAGCGTCA CGGAGGCGGT CGAGGTGCTT
CGGTCATGGT GA
 
Protein sequence
MSVVVVGAGP SGLLAASLLL DEGASPIVVA AGEGSLGLWP GWLAAPRDDG AVERAVASLN 
RADARLSSVD ERDRLIGPLG VAHRFAWAPP ELARVGPEDV VGFCGFAEMT ETRAAVAVAT
WQSQTGSAAV GFDLAPWGRR VPFELARFLG HLEGARALGR ALAPRVDGAV SVVAVPGLLG
IEDATRALAV LEEMLERRVG EVPLVTPALA GWRLDRRVRT ALAARGATFR RARVVEVGRG
GVRLADGAHV DADAVVLATG GVAGGGIAIG PDGSLTDSAR GVAIGDPAAW MMGEDVGLLG
YREVVVDEEA RVVAVGALRA HEGSGFAQVA QSVTEAVEVL RSW