Gene Afer_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0854 
Symbol 
ID8322917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp875503 
End bp876174 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID644951988 
Productputative signal transduction protein 
Protein accessionYP_003109473 
Protein GI256371649 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTC GCTTCGATAT CACCTCCGGG GATGCGGTCG TCCTCGCTCG CTTCCTTCGG 
ACCCTCGGCG ATGACGAGGC CGGCTTCGCC GAGCTCGCTC AGGTGGCGGC TGCAGACCCC 
GGGCTCGCTG CGAGCATCCT CAAGCTCGCG AACTCGTCGT ACTATGGACT CGCCGGCTCC 
GTCGAGCGAC TCGAGTTCGC GTGTGCGATC GTGGGCATCC TGGGGCTTCG CTCGCTGACC 
GTGGCCGAAC TCGCGCGGCG CCAGGGGCCC TATCCCGAGG GGCTTGCGGC CTTCACGACG 
TTGCTGGCCG CCCAGATGGC GGAGCGCTCG CCCCACACGA GCGTCGACCC GCAAGTGGCG 
CTCTCGACCG GGCTCGTGGC GACGCTCGGT TGGATCCTCG CCGCGCAGCA AGATCCCGTC 
GGCTATGCGA CGTGGCACGA CCTCGCGCTC GAGGATCGTC GAGCCTTCGA GGTGGAGCGT 
TGGGGACGAC CACTTGCGAG TCTCTCCCAA GAGGCGCTTC GGCACTGGGC GTTTCCCGAA 
GTGATCCTCG ATGCCGTCGG CGAACTCGAC GCGGCCGGCG ACGTGTCGAC CCTCGGGCGT 
CTCCTTCGAG AGAGCTGGCG CGCGGCGAGC GAGCGTCTCG GGCCCGATGG GGCCATGTTG 
ATGAGCGTGT GA
 
Protein sequence
MEIRFDITSG DAVVLARFLR TLGDDEAGFA ELAQVAAADP GLAASILKLA NSSYYGLAGS 
VERLEFACAI VGILGLRSLT VAELARRQGP YPEGLAAFTT LLAAQMAERS PHTSVDPQVA 
LSTGLVATLG WILAAQQDPV GYATWHDLAL EDRRAFEVER WGRPLASLSQ EALRHWAFPE 
VILDAVGELD AAGDVSTLGR LLRESWRAAS ERLGPDGAML MSV