Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0829 |
Symbol | |
ID | 8322892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 850508 |
End bp | 851776 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951963 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003109448 |
Protein GI | 256371624 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0384263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGAGC GACGGAGCCT CTCGCTCCGT GACCTCCTCA TCGCCGAGGC CGTGGCCGCC GGGCTCGGCG TCGCGGTGTG GGCGTTCGCC GTGCTTCGTC ACCTCGAGCT CGAGATCGTC GTGGCGGGTG TTCTCGCGCT CGTCATCGAA CCGATCGTCT CGAGGCTCGT GCGTCTCGGA CTGCCCCGTG TCGTCGCGGT GCTCGTCACC GCGGTGTTGG TGCTCGCCGC GCTCGTCGGC CTCGCGGCCG CGTTCGTCGT TCCGCTCGTG AACGCCGGTC AGCGGCTGCT CGGAGATCTC CCGGGCCTGC TCAGCCGCTT GCGTGCCCAT CGAGCCGCGA TCGAGGCGCT GCTCGTGCGC CTTCACCTCC AGCACGCGCT CGACGTGGGT GCGCAGTCGA TCGCCCACGC GGCGCAGTTG GCGGTGACCC CGGCGCTGTC CGTGGCGAGC GGTGCGGTCG GTTCGCTCGC CACGCTCGCG GTGATCGGCA CGCTCGCCGT GTTCCTCTCG CTCGAGGCGC CGAAAGCGAT CGCCTGGCTG GTGGCGCAGC TCGATGCGTC GCGGCGTCCT CGTGTCGAGG GCGTCCTGCA CGACGTCGCG ATCGCGGTGG CGGGCTACGT GCTCGGCAAC CTCGCGACTT CGGTGGTTGC CGGTCTGGTG ATCGGGGTGA CCTATGCGAT CCTCGGTCTC CCGGACCCAG CACTCATCGG ACTGTGGGTC GGGCTCGTCG ATCTCCTGCC GTTGGTCGGT GGGCTCGCAG GCGGAGTACC GGCGGTCGCG CTCGCGCTCG TCGGCGGACC CGAGGACGTC GTCATCGTGC TGATCGTGGT CCTGGCCTAC CAGCAGATCG AAAATCACGT GCTCAATCCG GTCGTCTATG CGAAGACGGT CCGGTTGAGT CCCCTCTGGG TCCTCGTGGC CATCTTGGTC GGCGCACAGG CTGCGTCGCT GCCGGGAGCG CTCATCGCCA TACCGATCGC GAGTGCGATC CAGGTGATCG CGCGTGAGAC GCTGCGCGAT CCGTTGCGGC GTTGGCTTGG GCGTGGCTCA GGCGCCGTGG TCGCGCAGGG GACCGATCTG CCAACCCCGA GCACGGACAC GGGCGACGAG CTCGTCCAGG CTGGCGAGGG TGGCAAGGGG AGCCCCGGGG GCGCTGGTGA CGTCGGAGTC GTGCAGCAGC AGCGTGGCAC CGGGGCCGAG CCGGTGCGTG AGGTCGGCGA GGATCGAGGT GCTGGACGCG GCAAACCGCC AGTCGCGCCC CCAGCTTGA
|
Protein sequence | MVERRSLSLR DLLIAEAVAA GLGVAVWAFA VLRHLELEIV VAGVLALVIE PIVSRLVRLG LPRVVAVLVT AVLVLAALVG LAAAFVVPLV NAGQRLLGDL PGLLSRLRAH RAAIEALLVR LHLQHALDVG AQSIAHAAQL AVTPALSVAS GAVGSLATLA VIGTLAVFLS LEAPKAIAWL VAQLDASRRP RVEGVLHDVA IAVAGYVLGN LATSVVAGLV IGVTYAILGL PDPALIGLWV GLVDLLPLVG GLAGGVPAVA LALVGGPEDV VIVLIVVLAY QQIENHVLNP VVYAKTVRLS PLWVLVAILV GAQAASLPGA LIAIPIASAI QVIARETLRD PLRRWLGRGS GAVVAQGTDL PTPSTDTGDE LVQAGEGGKG SPGGAGDVGV VQQQRGTGAE PVREVGEDRG AGRGKPPVAP PA
|
| |