Gene Afer_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0829 
Symbol 
ID8322892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp850508 
End bp851776 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content70% 
IMG OID644951963 
Productprotein of unknown function UPF0118 
Protein accessionYP_003109448 
Protein GI256371624 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0384263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGC GACGGAGCCT CTCGCTCCGT GACCTCCTCA TCGCCGAGGC CGTGGCCGCC 
GGGCTCGGCG TCGCGGTGTG GGCGTTCGCC GTGCTTCGTC ACCTCGAGCT CGAGATCGTC
GTGGCGGGTG TTCTCGCGCT CGTCATCGAA CCGATCGTCT CGAGGCTCGT GCGTCTCGGA
CTGCCCCGTG TCGTCGCGGT GCTCGTCACC GCGGTGTTGG TGCTCGCCGC GCTCGTCGGC
CTCGCGGCCG CGTTCGTCGT TCCGCTCGTG AACGCCGGTC AGCGGCTGCT CGGAGATCTC
CCGGGCCTGC TCAGCCGCTT GCGTGCCCAT CGAGCCGCGA TCGAGGCGCT GCTCGTGCGC
CTTCACCTCC AGCACGCGCT CGACGTGGGT GCGCAGTCGA TCGCCCACGC GGCGCAGTTG
GCGGTGACCC CGGCGCTGTC CGTGGCGAGC GGTGCGGTCG GTTCGCTCGC CACGCTCGCG
GTGATCGGCA CGCTCGCCGT GTTCCTCTCG CTCGAGGCGC CGAAAGCGAT CGCCTGGCTG
GTGGCGCAGC TCGATGCGTC GCGGCGTCCT CGTGTCGAGG GCGTCCTGCA CGACGTCGCG
ATCGCGGTGG CGGGCTACGT GCTCGGCAAC CTCGCGACTT CGGTGGTTGC CGGTCTGGTG
ATCGGGGTGA CCTATGCGAT CCTCGGTCTC CCGGACCCAG CACTCATCGG ACTGTGGGTC
GGGCTCGTCG ATCTCCTGCC GTTGGTCGGT GGGCTCGCAG GCGGAGTACC GGCGGTCGCG
CTCGCGCTCG TCGGCGGACC CGAGGACGTC GTCATCGTGC TGATCGTGGT CCTGGCCTAC
CAGCAGATCG AAAATCACGT GCTCAATCCG GTCGTCTATG CGAAGACGGT CCGGTTGAGT
CCCCTCTGGG TCCTCGTGGC CATCTTGGTC GGCGCACAGG CTGCGTCGCT GCCGGGAGCG
CTCATCGCCA TACCGATCGC GAGTGCGATC CAGGTGATCG CGCGTGAGAC GCTGCGCGAT
CCGTTGCGGC GTTGGCTTGG GCGTGGCTCA GGCGCCGTGG TCGCGCAGGG GACCGATCTG
CCAACCCCGA GCACGGACAC GGGCGACGAG CTCGTCCAGG CTGGCGAGGG TGGCAAGGGG
AGCCCCGGGG GCGCTGGTGA CGTCGGAGTC GTGCAGCAGC AGCGTGGCAC CGGGGCCGAG
CCGGTGCGTG AGGTCGGCGA GGATCGAGGT GCTGGACGCG GCAAACCGCC AGTCGCGCCC
CCAGCTTGA
 
Protein sequence
MVERRSLSLR DLLIAEAVAA GLGVAVWAFA VLRHLELEIV VAGVLALVIE PIVSRLVRLG 
LPRVVAVLVT AVLVLAALVG LAAAFVVPLV NAGQRLLGDL PGLLSRLRAH RAAIEALLVR
LHLQHALDVG AQSIAHAAQL AVTPALSVAS GAVGSLATLA VIGTLAVFLS LEAPKAIAWL
VAQLDASRRP RVEGVLHDVA IAVAGYVLGN LATSVVAGLV IGVTYAILGL PDPALIGLWV
GLVDLLPLVG GLAGGVPAVA LALVGGPEDV VIVLIVVLAY QQIENHVLNP VVYAKTVRLS
PLWVLVAILV GAQAASLPGA LIAIPIASAI QVIARETLRD PLRRWLGRGS GAVVAQGTDL
PTPSTDTGDE LVQAGEGGKG SPGGAGDVGV VQQQRGTGAE PVREVGEDRG AGRGKPPVAP
PA