Gene Afer_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0827 
Symbol 
ID8322890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp847928 
End bp849166 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID644951961 
Productputative acetyl-CoA hydrolase 
Protein accessionYP_003109446 
Protein GI256371622 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.385566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCA TCGGAGACGA CACGTTACGC AAGCGGCTCG CCGCCATCGG CCGTCGTGAG 
CCGCGCATCG TGGCAGGCGG GAACTTCCTC ACCCCAACGG CCCTCCTCGG CGCCGCCGAG
GCCGAACTCG AACGCTGGCG CCTGTTCATC CTGAACGCCC AGCACCCGAT CCCGGCTCGC
CCGGGCATCA CCTACGAGTC GCCCTTCCTC GGCCCAGCCA TCCGCGACCA AGGCGACGCC
CTGCGCTATC TGCCCATGCG CCTGTCGCTG GTGCCGACCC TCCTCGCCAC CACGCTCGTA
CCCGACGTCG TGATGGTCCA GACGTCCCTT CCGATCGCGG GTCGGGTCTC ACTCGGAACG
GAGGTCAACA TCTTGCCTGC GGCGATCGAG GCCGTTCGCT CGCACGGTGG CCTCGTCATC
GCCCAGCTCA ACCCTCATGT GCCCTACGTC TTCGGCGACG GAGAGATCGA GACCGACGCC
ATCGACTGGG CCATCGAGGC AGAGGCGCCG CTGTCCTCGC CGGACGCGCG CAACGCCGAC
GATCCCCAGG CAGCAGCCAT CGCCGAGCAC GTCGCACGTC TTGTCCCGAG CGGCGCCACG
CTCCAGCTCG GTATCGGCGC CATCCCCGAT CGCGTCCTGG CGCGCTTGGA GGATCGACGT
GGCTTGAGGA TCTGGAGCGA GATGATCAGC GACGGCGTCC TCGCCCTGGA GCGGCGAGCC
GCCCTCGATC GGAGCGAGCC CATCACCGCG TCGTTCCTCT TTGGCTCGGC TGAACTCTAT
GCGTGGGCCG ACCGCAACCC GAGGCTCCGT CTCCTTCGGA CCGAGACGAT CAACGACCCT
GCCATGATCA TGCGCCAGCC ACGCATGACC GCGATCAACG CCGCCCTCCA GGTGGATCTG
TTCGCGCAGG CGAACGCGTG CCACCTCGGC CCTCGCGTCA TCTCCGGCTT TGGCGGACAA
CCCGACTTCA CCGTCGGTGC GCTCCATGCG CGCGAGGGCC AGTCCATCAT CGCACTGCGC
TCCTGGCACT CCCCAACCGA CGCCTCGAAC GTGCGCGCCT GCCTCGACAC GCCGGTGACG
TCGTTCCAGC ACTCCGCGAT CGTTTCGGAG CACGGTGTCG CCCACCTCTT CGGCGCGAGC
GCGACTGAAC AAGCGCAACG CATCATCACC ATGGTCGCCG ATCCGCGAGC TCGCGACGAA
CTCGCAGCCG ACGCTCGCGC CGACCACGGG CGCGCATAG
 
Protein sequence
MEIIGDDTLR KRLAAIGRRE PRIVAGGNFL TPTALLGAAE AELERWRLFI LNAQHPIPAR 
PGITYESPFL GPAIRDQGDA LRYLPMRLSL VPTLLATTLV PDVVMVQTSL PIAGRVSLGT
EVNILPAAIE AVRSHGGLVI AQLNPHVPYV FGDGEIETDA IDWAIEAEAP LSSPDARNAD
DPQAAAIAEH VARLVPSGAT LQLGIGAIPD RVLARLEDRR GLRIWSEMIS DGVLALERRA
ALDRSEPITA SFLFGSAELY AWADRNPRLR LLRTETINDP AMIMRQPRMT AINAALQVDL
FAQANACHLG PRVISGFGGQ PDFTVGALHA REGQSIIALR SWHSPTDASN VRACLDTPVT
SFQHSAIVSE HGVAHLFGAS ATEQAQRIIT MVADPRARDE LAADARADHG RA