| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0824 |
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| Symbol | |
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| ID | 8322887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 844138 |
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| End bp | 845118 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951958 |
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| Product | Transketolase central region |
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| Protein accession | YP_003109443 |
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| Protein GI | 256371619 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.862556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGC TCACCATGGC CCAGGCCCTG AATCAAGCGC TCGCCCAGGC GCTCGAGGGT
GACGAGCGCG TGCTGATCCT CGGCGAGGAC GTCGGACGCG ACGGCGGTGT CTTTCGCATT
ACGGACGGCC TGATCGACCG ATTCGGTCCC GAGCGGGTCG TCGACACGCC GCTCGCGGAG
TCCGGGATCG TGGGAACGTC CGTCGGCCTG GCGATGGGCG GCATGCGACC CATCGCCGAG
ATCCAGTTCT TCGGGTTCAT CTACGAGACC ATGGACCAGA TCGCCTCGCA GGCGGCCCGC
GTGCGGTTTC GGTCGATGGG GCGCTTCAGC GCGCCGCTCG TGATCCGGAC CCCCTACGGC
GGTGGTGTCA AGGCCCCGGA GATTCACTCC GATTCACTCG AGGCCTTGTT CGTACACACG
CCGGGTATCA AGGTCGTCAC GCCGTCGAAC CCCTACGACG CGAAGGGTCT CCTGCTCGCC
GCCGTCGACG ATCCCGACCC GGTGCTGTTC CTCGAGCCGA TGCGGTTGTA CCGTGCGTTC
CGCGACGAGG TGCCCGAGGA ACCCTATCGG GTGCCCCTCG GCGTCGCGAA TGTCGTTCGC
GAGGGGCGCG ACGTCACCTT GATCGGATGG GGCGCCTCGA TGCCCGTGGT GCTCCAGGCC
GCCGACGAGC TGATCGCACG CCACGACGTC ATGCCCGAGG TGATCGACCT TCGGACGCTC
TCTCCGCTCG ACGAGGCGAC GATCGTCCAG AGCGTGCAGC ACACCCAGCG AGCCGTGGTC
GTGCACGAGG CGGTGCGCAC CGGGGGACTC GGCGCGGAGG TCGCTGCGCT CGTCCAAGAG
CGCGCGTTCT TGTATCTCGA GGCGCCGGTC GGCAGGGTCT CGGGCTACGA CACGCCCTAC
CCCATGACCA TGTTCGAGGA CCTGTGGCTC CCTGACGCGA CCCAGGTGGT GAGCGCCGCG
CTGGCAGCGG TTCGCTACTA G
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| Protein sequence | MAKLTMAQAL NQALAQALEG DERVLILGED VGRDGGVFRI TDGLIDRFGP ERVVDTPLAE
SGIVGTSVGL AMGGMRPIAE IQFFGFIYET MDQIASQAAR VRFRSMGRFS APLVIRTPYG
GGVKAPEIHS DSLEALFVHT PGIKVVTPSN PYDAKGLLLA AVDDPDPVLF LEPMRLYRAF
RDEVPEEPYR VPLGVANVVR EGRDVTLIGW GASMPVVLQA ADELIARHDV MPEVIDLRTL
SPLDEATIVQ SVQHTQRAVV VHEAVRTGGL GAEVAALVQE RAFLYLEAPV GRVSGYDTPY
PMTMFEDLWL PDATQVVSAA LAAVRY
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