| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0708 |
|---|
| Symbol | |
|---|
| ID | 8322768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 713352 |
|---|
| End bp | 714143 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644951843 |
|---|
| Product | RimK domain protein ATP-grasp |
|---|
| Protein accession | YP_003109331 |
|---|
| Protein GI | 256371507 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG TCCTCCTCTG TTACGATCCA TGGTCCCTGG CGCGCAACGT GCACTTTGCA
CGCGCGCTCC GCGACGGGCT CGAGCGACAC TTCGGCTCGT GCTCGCTCCG CATGGTCGGG
CCCGGTGATC GCCCGGCGTT GGCTGCCGAC ACCGCCATCG CGATCGCCCG CTCGCGCGAT
CGCGAGCTGC GTCGCTGGCT CGCCGACCGG CTCCCGGTCG TGGTGAACCC ACCGCTTCTG
GCCCTCATCG GCAACGACAA GCTGGCGACC GCCCGGTGGC TCGCCGAGCA CGAGCTCCCC
GGACCACCAA CGACGCCCTC GTGGCTCGCA CACCGCGCCT TCTCGGCCAC TGATCTCGTC
GTCAAACCTC GAGCGGGCCA CGGCGGCCAC GGCGTGCGCA TCGTCCCGGC AGCCGCACCA
CCCAGGTGCG ATCTCGACGC GTGGATCACC CAAGCCTTCG TCCAAGGCGG TGAGCGCGTC
CTGCGCGCCT ACGTCGTCGG GAGCACGATC GCAGCATGGA CCGAGCGACG CGCGGCCGAC
GGGGTGGCTG CGAACCTGAG CCGTGGAGCA TCGGGACACC TCGCCACACC GACTCGCGAG
TCCCATCGCC TCGCTACCCG TGTCATGGGT CTGATCGGAC CTGGCTACTA CGGCATCGAC
CTCTTCGAGC ACGACGACGA CGTGGTGGTC AATGAGATCG AAGATGTCGT CGGAGCACGA
ACACTCGCTC GCGCTGGGAT CGACGTCGTC GATCTCGTCG TCCAGGCCGT GGCTCACTCA
GCGGTTCGAT AG
|
|---|
| Protein sequence | MSRVLLCYDP WSLARNVHFA RALRDGLERH FGSCSLRMVG PGDRPALAAD TAIAIARSRD
RELRRWLADR LPVVVNPPLL ALIGNDKLAT ARWLAEHELP GPPTTPSWLA HRAFSATDLV
VKPRAGHGGH GVRIVPAAAP PRCDLDAWIT QAFVQGGERV LRAYVVGSTI AAWTERRAAD
GVAANLSRGA SGHLATPTRE SHRLATRVMG LIGPGYYGID LFEHDDDVVV NEIEDVVGAR
TLARAGIDVV DLVVQAVAHS AVR
|
|---|
| |