Gene Afer_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0541 
Symbol 
ID8322600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp544042 
End bp545217 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content70% 
IMG OID644951686 
Producthypothetical protein 
Protein accessionYP_003109175 
Protein GI256371351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG CGATCGTGAT CGTCGCGCTC TTCGTGGTGG TCGGCGTCGT GGCCATCGTC 
TCGCTTCGAG GACGTACGCG CGAGGTGCGC ACGGTCGATC ACCATCAGCG AGCGCTCGAC
ACGCTCGAGC GCTTCGCCAA GGAGCGCGGT GTGCAAGCCG ACCATCGCGT CGGCTTGCCC
AAGAGCGAGC AACGTCGAGT CGCCGCCGGA TCGGACGACG CGCCCCCGGT GCGGCTCGAC
CTCGGTCGGC TCGCCGACCT CACCGACCCG GACATGATCC GCATCGAGGC GGACTACCTG
GCGAGTGGCG CCAGCGCCGA GACATCCGCT CAGGCGCCCG GTGACGAGGA ACCGACGAAG
GATGCTGCCG TGGCCGCATC CACGGAGGAC GAGGCGGTCG AGCAGGCCCC GCCACCGGCG
ACGAGGCCGA TCGATCGGGC CGTGGCCGAT CGGACCACGG CGATGGCGGC GATCACGCCC
GATCGAGCGC CCGAGGACCG AACCGAACTG CTCTCGGCGG TGGGCCCATC GGCCGCCGTG
GCCGCCGACG ATCGATCGCA CCGCGGTGAC GACGCTGTGC GCGAGCACCG GGTCTACCAG
CTCCATCGGC GTACTCGGCT CCCGGCCGTG ATCGGTGGTG CGGGAATCGC GGCGATCGCG
ATCGGTCTCG TCGCCTTCGA ACTCTCGAGC CACCATGCGG CAGCACCGAC GTCGCAGTCC
GCCTCGAGCC CGACCTCGTC GGCGCCCTCG ACCACGAAGC AGTCGTCGAA CGCGAAGACC
TCGACGACGT CGGCGTCGAA GAAGACCTCG ACGACGTCGA AGACGACGTC GTCGGCGAAG
AAGGCCAAGG GTTCGGCGAG CGCTGGGCCG GCGGTCGCGC TGGTGAGCTC CAGCAGTACC
GGCGCGACCT ACAACGTGGT CGGCGGTGCC CACACCGTCG TTCTGCAGGT GTCGAGCGCA
CCCTGCTGGG TCGAGGACGC CCAGGCTCCC GGTGGTCAGG TGCTCTGGGA CGCGACCTTG
CCGGCGGGTG GCAGCTACAC GATCTCCTGG AGCGGTGGAC CGCTGTGGCT CCGCACCGGC
AACTCGGGCG TGCTGTCGGT GAGCGTGAAC GGCCATCCGG TGCACTTCAG CGCACCGCCG
GGTCCGTTCG ACCTGCTGTT CCAGCCGGTG CGTTAG
 
Protein sequence
MNAAIVIVAL FVVVGVVAIV SLRGRTREVR TVDHHQRALD TLERFAKERG VQADHRVGLP 
KSEQRRVAAG SDDAPPVRLD LGRLADLTDP DMIRIEADYL ASGASAETSA QAPGDEEPTK
DAAVAASTED EAVEQAPPPA TRPIDRAVAD RTTAMAAITP DRAPEDRTEL LSAVGPSAAV
AADDRSHRGD DAVREHRVYQ LHRRTRLPAV IGGAGIAAIA IGLVAFELSS HHAAAPTSQS
ASSPTSSAPS TTKQSSNAKT STTSASKKTS TTSKTTSSAK KAKGSASAGP AVALVSSSST
GATYNVVGGA HTVVLQVSSA PCWVEDAQAP GGQVLWDATL PAGGSYTISW SGGPLWLRTG
NSGVLSVSVN GHPVHFSAPP GPFDLLFQPV R