Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0541 |
Symbol | |
ID | 8322600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 544042 |
End bp | 545217 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951686 |
Product | hypothetical protein |
Protein accession | YP_003109175 |
Protein GI | 256371351 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCAG CGATCGTGAT CGTCGCGCTC TTCGTGGTGG TCGGCGTCGT GGCCATCGTC TCGCTTCGAG GACGTACGCG CGAGGTGCGC ACGGTCGATC ACCATCAGCG AGCGCTCGAC ACGCTCGAGC GCTTCGCCAA GGAGCGCGGT GTGCAAGCCG ACCATCGCGT CGGCTTGCCC AAGAGCGAGC AACGTCGAGT CGCCGCCGGA TCGGACGACG CGCCCCCGGT GCGGCTCGAC CTCGGTCGGC TCGCCGACCT CACCGACCCG GACATGATCC GCATCGAGGC GGACTACCTG GCGAGTGGCG CCAGCGCCGA GACATCCGCT CAGGCGCCCG GTGACGAGGA ACCGACGAAG GATGCTGCCG TGGCCGCATC CACGGAGGAC GAGGCGGTCG AGCAGGCCCC GCCACCGGCG ACGAGGCCGA TCGATCGGGC CGTGGCCGAT CGGACCACGG CGATGGCGGC GATCACGCCC GATCGAGCGC CCGAGGACCG AACCGAACTG CTCTCGGCGG TGGGCCCATC GGCCGCCGTG GCCGCCGACG ATCGATCGCA CCGCGGTGAC GACGCTGTGC GCGAGCACCG GGTCTACCAG CTCCATCGGC GTACTCGGCT CCCGGCCGTG ATCGGTGGTG CGGGAATCGC GGCGATCGCG ATCGGTCTCG TCGCCTTCGA ACTCTCGAGC CACCATGCGG CAGCACCGAC GTCGCAGTCC GCCTCGAGCC CGACCTCGTC GGCGCCCTCG ACCACGAAGC AGTCGTCGAA CGCGAAGACC TCGACGACGT CGGCGTCGAA GAAGACCTCG ACGACGTCGA AGACGACGTC GTCGGCGAAG AAGGCCAAGG GTTCGGCGAG CGCTGGGCCG GCGGTCGCGC TGGTGAGCTC CAGCAGTACC GGCGCGACCT ACAACGTGGT CGGCGGTGCC CACACCGTCG TTCTGCAGGT GTCGAGCGCA CCCTGCTGGG TCGAGGACGC CCAGGCTCCC GGTGGTCAGG TGCTCTGGGA CGCGACCTTG CCGGCGGGTG GCAGCTACAC GATCTCCTGG AGCGGTGGAC CGCTGTGGCT CCGCACCGGC AACTCGGGCG TGCTGTCGGT GAGCGTGAAC GGCCATCCGG TGCACTTCAG CGCACCGCCG GGTCCGTTCG ACCTGCTGTT CCAGCCGGTG CGTTAG
|
Protein sequence | MNAAIVIVAL FVVVGVVAIV SLRGRTREVR TVDHHQRALD TLERFAKERG VQADHRVGLP KSEQRRVAAG SDDAPPVRLD LGRLADLTDP DMIRIEADYL ASGASAETSA QAPGDEEPTK DAAVAASTED EAVEQAPPPA TRPIDRAVAD RTTAMAAITP DRAPEDRTEL LSAVGPSAAV AADDRSHRGD DAVREHRVYQ LHRRTRLPAV IGGAGIAAIA IGLVAFELSS HHAAAPTSQS ASSPTSSAPS TTKQSSNAKT STTSASKKTS TTSKTTSSAK KAKGSASAGP AVALVSSSST GATYNVVGGA HTVVLQVSSA PCWVEDAQAP GGQVLWDATL PAGGSYTISW SGGPLWLRTG NSGVLSVSVN GHPVHFSAPP GPFDLLFQPV R
|
| |