| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0460 |
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| Symbol | |
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| ID | 8322519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 457915 |
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| End bp | 459468 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951612 |
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| Product | GMP synthase, large subunit |
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| Protein accession | YP_003109101 |
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| Protein GI | 256371277 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
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| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.797387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCACG CCGACGAGCA GGTCGTCCTT GTCGTCGACT TCGGCGCGCA GTACGCGCAG
CTGATCGCAC GGCGGGTGCG CGAACTCCAC GTGTACTCGG AGGTCGTCCC GGCTCGGGAC
GCACTGGCGT TCGTCCGCTC GCGGCGGCCG GCGGCGGTGA TCCTCTCGGG TGGTCCGGCG
TCCGTATACG CCCCCGGTGC GCCGGGGCTC GCGCCCGAGG TGCTCGAGGC GAACGTGCCC
ATCCTCGGGA TCTGCTACGG CGCTCAGCTG ATGGCCCAGC AGCTTGGCGG CGTCGTCGAG
CACGGAGGTT CGGGTGAGTA CGGCAGAACG GTGATCGAGC GCACCGACGA GCGTGCGCAC
CTGCTCCCGC CGCTCCGTGG CGAGGCGCCT GAGACGGTGT GGATGAGTCA CGCCGACGCG
ATCGTTGCCC CGCCCGAGGG CGCGCGGGTG GTCGCGAGCT CGGCCGGGGC ACCGGTCGCG
GCCTTCGAGG ATCCCGCGAG GCGGCGCTTC GGTGTGCAGT GGCATCCCGA GGTCTCGCAC
ACCCCAGGTG GCATGGAGCT CCTCGGACGG TTCCTGTTCG ACGTGGTGGG GCTCGAGCCG
CGCTGGACGA GTTTTTCGAT CATCGAGCAG GCGATCGCAG AGGTCCGGAG CACGGTCGGC
GATGGTCGGG CGATCTGTGC GCTCTCGGGT GGGGTGGATT CGACCGTGGC CGCGGCGCTC
ACCGCCGAGG CGATCGGCGA CCGGCTCACC TGCGTCTTCG TCGACACGGG CCTCCTGCGC
TCGGGCGAGG CGGAGCAGGT CGAACATCTG TTCCGTTCCC AGTTCGACAT CGAGCTGATC
GTGGTGGACG CGGCCGATCG CTTCTTCGAC GCCTTGGCGG GCGTGACCGA CCCCGAGGCC
AAGCGCAAGA TCATCGGCGA ACTCTTCATC CGCATCTTCG AAGAAACGGC GGCCTCGAAG
ACCAACGCGA CCCACCTCGT CCAGGGCACG CTCTATCCGG ACATCGTCGA GTCCGGTAGC
GATGGCTCGG CGACCATCAA GTCGCACCAC AACGTCGGCG GCCTCCCGGA CGACGTCGCG
TTCACGATCG TCGAGCCACT GCGACGCCTG TTCAAGGACG AGGTCCGTCG CATCGGCGTC
GAGCTCGGTA TCCCCGAGTC GTTCGTGTGG CGCCAACCAT TCCCCGGTCC GGGGATCGCG
GTTCGAGTGC TCGGCGAGGT GACCGCAGAG CGGGTCGAGA CGGTTCGCCG TGCGGATCGC
ATCGTCCAAG ACGAGCTCGA CGAGGCTGGG CTCTCGCGCT CGCTATGGCA GGCCTTCGCG
GTCCTGGCCC CTGGGCTCCG GTCGGTCGGC GTCTCGGGGG ACGCGCGTAC CTACGACGCC
CCGGTCATCG TGAGGGCGGT CGAGTCCGAG GACGCCATGA CCGCAGATTG GGCACGGCTG
CCATGGGAGG TGCTCGATCG CATCTCGCGG CGGATCGTCA ACGAGGTCCC GGGCGTCAAT
CGCGTCGTCT ATGACGTGAC CTCCAAGCCG CCAGGCACCA TCGAGTGGGA GTGA
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| Protein sequence | MRHADEQVVL VVDFGAQYAQ LIARRVRELH VYSEVVPARD ALAFVRSRRP AAVILSGGPA
SVYAPGAPGL APEVLEANVP ILGICYGAQL MAQQLGGVVE HGGSGEYGRT VIERTDERAH
LLPPLRGEAP ETVWMSHADA IVAPPEGARV VASSAGAPVA AFEDPARRRF GVQWHPEVSH
TPGGMELLGR FLFDVVGLEP RWTSFSIIEQ AIAEVRSTVG DGRAICALSG GVDSTVAAAL
TAEAIGDRLT CVFVDTGLLR SGEAEQVEHL FRSQFDIELI VVDAADRFFD ALAGVTDPEA
KRKIIGELFI RIFEETAASK TNATHLVQGT LYPDIVESGS DGSATIKSHH NVGGLPDDVA
FTIVEPLRRL FKDEVRRIGV ELGIPESFVW RQPFPGPGIA VRVLGEVTAE RVETVRRADR
IVQDELDEAG LSRSLWQAFA VLAPGLRSVG VSGDARTYDA PVIVRAVESE DAMTADWARL
PWEVLDRISR RIVNEVPGVN RVVYDVTSKP PGTIEWE
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