Gene Afer_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0403 
Symbol 
ID8322462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp414927 
End bp415583 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID644951555 
Productribosomal protein L22 
Protein accessionYP_003109044 
Protein GI256371220 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGTCA CAGTGACCGA GCGCCCGCGC TCGCGAGCGG TGCTCCGGAA CTACGGCGCG 
TCTGCGTCGA AGGTGCGAGA GGTTCTTGGC ATCATTCGAG GCAAGCCGGT CGAGCAGGCC
ATTCGCGAAC TGTCGCTCGT GAGCCGTGGT CCGGCTGAGG CGGTCGGCAA GCTCCTCGCG
AGTGCCGTGG CCAACGCGAC GGTCCAGCAC GGGCTGGGCG TGTCCGACAT GGTGGTGCGG
CTGGCCTATG CGGACGAAGG GACGACGCTG AAGCGGTTTC GGCCGCGTGC GCGCGGTCGT
GCGACGCGCA TCCGCAAGCG GACGTGTCAC ATCACGGTTG TGGTCGAGGA GATGACGCTC
GAGGAGCGCC AGCGCGCCGT GGCGCAGACC GGCCGTCGTG CCGTGAGCCG CCAGCGGCGC
GTGCAGTCCT CTCGTCGCGG ACGCCAGCAG GCGCAGGCGA CCTCGGCAGA GGCGACCTCG
GCAGAGGTGG CCACTTCGCA GCCCGAGATC ACGAGCGAGG CGGCAGCGTC GGAGCAGACG
GTCGAGGTCA CGGCTGCCGA GGAGCAGGTT GCAGCTCTCG TTGCCACCGG CGAGGAGACC
GGGGCCGAGA CGCCGAGCGC CGCCTCGGAA GAGGCCGCCG AGGGCGGGGA GGAGTAG
 
Protein sequence
MAVTVTERPR SRAVLRNYGA SASKVREVLG IIRGKPVEQA IRELSLVSRG PAEAVGKLLA 
SAVANATVQH GLGVSDMVVR LAYADEGTTL KRFRPRARGR ATRIRKRTCH ITVVVEEMTL
EERQRAVAQT GRRAVSRQRR VQSSRRGRQQ AQATSAEATS AEVATSQPEI TSEAAASEQT
VEVTAAEEQV AALVATGEET GAETPSAASE EAAEGGEE