| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0377 |
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| Symbol | |
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| ID | 8322432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 387910 |
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| End bp | 388701 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951525 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003109018 |
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| Protein GI | 256371194 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.491233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAGC GCTGGCGACT CGACGGATCG GTCGCGGTCG TGACCGGGGC CGGGTCTCCA
ACGGGCATCG GGTTTGCGAT CGCCACCACG CTCGGCGAGC TCGGTGCTCG CCTCGGCCTG
ATCAGTCGCT CACCGAGGAT CTTCACTCGA CGCGACGAAC TCATCGAACG AGGGATCGAC
GCGGTCGCAT CCACCGCCGA CCTCACCGTC GCGGCCGAGG TCGCAGAGGC TGCCCACTCC
ATCACCGCGC GCCTCGGTCC TCCCGCGATC GTCGTCGCCA ACGCCGGCAT GACCGCCGTC
GGGGACCCGG AGCGCCAAGG CGCCCTGTGG AGCCTGCCAG AGGACACCAT CACGCACGAA
CTCGATCGCA ACCTCCTCAG CGCCGTGCTC ACCGTCCGAG CCTTCGCACC GACACTGCTC
ACCCACGGCG CGCGCGGACG GGTGGTCCTC GTCGGCTCTA CGACTGGCCA CGTCAACGCC
ACCGTGCACA GCGCCCTGTA CGCTGCCGCC AAGGCCGGCC TCGTCGGTCT CGCGCGCTCA
CTCGCGCTCG ACCTCGCCCC AGCCACCATC AACGTCGTCG CGCCAGGCTG GATCGCCACG
GGGTCACAGA CGCCCGACGA ACGAGCTGCC GGTCTCGCCA GCCCGCTCGG GCGATCCGGC
CTTCCGACAG AGGTTGCCGA CGTCGTCGCC TTCCTCTGCC TACCAGCAGC GAGCTACGTC
TCGGGTTCGG TCATCGTCGT CGATGGTGCG AACAGCGTGA TGGAGGACCG ACGCTGGCCC
CAACCCGACT GA
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| Protein sequence | MHERWRLDGS VAVVTGAGSP TGIGFAIATT LGELGARLGL ISRSPRIFTR RDELIERGID
AVASTADLTV AAEVAEAAHS ITARLGPPAI VVANAGMTAV GDPERQGALW SLPEDTITHE
LDRNLLSAVL TVRAFAPTLL THGARGRVVL VGSTTGHVNA TVHSALYAAA KAGLVGLARS
LALDLAPATI NVVAPGWIAT GSQTPDERAA GLASPLGRSG LPTEVADVVA FLCLPAASYV
SGSVIVVDGA NSVMEDRRWP QPD
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