Gene Afer_0367 details

Gene Information

• Locus tag: Afer_0367
• ID: 8322422
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 375675
• End bp: 376301
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644951515
• Product: NADH-quinone oxidoreductase, E subunit
• Protein accession: YP_003109008
• Protein GI: 256371184
• COG category: [C] Energy production and conversion
• COG ID: [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
• TIGRFAM ID: [TIGR01958] NADH-quinone oxidoreductase, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGACGGT TCGAGGGCGA GTTCGCGGCA CGTGCCGAGG AACTCGTCGG GTTGTATCCT 
GAGCGTCGCT CCGCGGTGCT GCCGCTGTGT CATCTGGCGC AAGAGCAGGA CGGTTGGTTG 
ACGCCCGAGG CGATTCGTCA CATCGCCGAG CTGGTCGGGC AGACCCCGGC CGAAGTGCAA 
GGTGCGGCGT CGTTCTACGA CATGTTGCAC CTCGAGCCGG TCGGTCGTTA CGTGGTCGGG 
ATCTGCACCA ACATCGCGTG TCTGCTGCGC GATGGGGACC GCCTGCTCGA GGCCGCCGAG 
GAGCTGCTCG GCGTGGGCGT GGGCGGCACA ACACCCGACG GGCTGATCAC GCTCGAAGAG 
GTCGAGTGCG TCGCGCACTG CGACAAGGCG CCGGCCGTGC AGGTGAACTA CCGCTACTTC 
GGTCCGGTGA CGCCGACGAG CTTCGAGGAG CTCGTCGGGC AGCTGCGCCG TGGTGAACTC 
GATGGGGAGG TGCCCCCGCA CGGGGTCCTC TCGCGAGTGC GCCGTGCGGC CCCGCCGCCG 
ATCCCACTGG ATGAGATCGA CGCCGAGCGG GCCCGCCAAG ACGCGGAGCG CGCCGAACGC 
GCTCGGCAGG CGGAGAGCGG ATCATGA 

 

Protein sequence

MGRFEGEFAA RAEELVGLYP ERRSAVLPLC HLAQEQDGWL TPEAIRHIAE LVGQTPAEVQ 
GAASFYDMLH LEPVGRYVVG ICTNIACLLR DGDRLLEAAE ELLGVGVGGT TPDGLITLEE 
VECVAHCDKA PAVQVNYRYF GPVTPTSFEE LVGQLRRGEL DGEVPPHGVL SRVRRAAPPP 
IPLDEIDAER ARQDAERAER ARQAESGS