| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0254 |
|---|
| Symbol | |
|---|
| ID | 8322308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 259662 |
|---|
| End bp | 261050 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644951402 |
|---|
| Product | Chloride channel core |
|---|
| Protein accession | YP_003108896 |
|---|
| Protein GI | 256371072 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.343931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGG CGGACCGCGA GCATCCCTGG CACCTGCGTC GCGTTCGCTC ACCCCAGCCG
CTCATCAGGC GTCGACTCCC CACCGGGCGA GGCGCGACCG AGCAGCCCAA CGCCACCGGC
GATGGTGACG CAGAGCTCAC GCTCAAGTTC TGGATTTTCC TCATCCTGAC GGGCGTCGGG
GCCGGGCTCT TCGGCGACCT CATGATGGTC ATCCTCTTCA ACGTCCAGCA CATCACGTAC
CACTACCACA TCGGCTCGTT CCAGGCGGCC GTCGGGCGCT CCGCGCCGAT CTACCGCCTC
GAGATGCTCA CGCTCGCCGG CGCGATCGGT GGGCCCGCAT GGTTCATCCT CTCGAAGTTC
ACCAAAGGTG AGCGCTCCGA GGTGGACGAC GTCGTCTGGA AGGGCGAGGG CGATCTGCAC
ATCCGCAAGA GCCTCGGCAC CTCGATCATC CAAGAGGTCG TCATCGGCAT GGGCGCCTCG
CTCGGACGCG AGGCCGCCCC GAAGCTCCTC GGCGCGGTGT CCGGCAGCTA CCTCGGCCGA
TGGGGCAAGC TGTCGCCAGC GCAGAAGCGC CTCCTCATCG CCTGCGGTGC GGGGGCAGGA
CTCGCCGCCG TCTACAACGT TCCCCTCGGC GGCGCCCTGT TCACCGCGGA GATCATGATG
GGTGAGGTCA CCCTGCCCGT CGTCCTCCCG GCACTCGCAG CATCCGTCAT CGCCACGTAC
GTCGGCTACC TCTACCTCCC CGACCACGCG ACCTACGTCG GGGTGGCCAA CTACCAGTTC
CACCTCGCCC AGATCGTCTT CGCCGTGATC GCCGGACCGC TGATCGGCCT CTTCTCGGTC
GCCTTCGTGC GCCTCATGGG CCTCGTCACG CACCATCGCT TCACCGGTCG GTGGGTCCTC
ATCGGACCAC TCCTGTCGTT CTCGATCCTC GGCTTCATCG GCATGCGCTA TTTCCAGCTC
TTCGGCAACG GCAAGGACAT GGCGCACGCG GTCTTCTTGA ACCAGCTCGG TAGCCTCGGC
TTGCTCGCAG CACTCTTCCT CTTGAAGCCC ATCGTCACCG CGATGGCACT GGGTACCGGT
GCCTCCGGCG GCCTGTTCAC CCCGACGTTG TCGACGGGCG CGGTCCTCGG CGGGTTCCTC
GGCGGCATCT GGTCGTTCGT CATGCCGGGG GCAGCGATCG GCTCCTACGC CATGATCGGC
GCGGCGGCGA TGATGGGTGC CGGAATGCAA GCCCCTCTCG CGGGGATCGT GCTGGTACTG
GAGCTCACCC ACTCGGGCCT CGACCTCATC GTGCCGCTCA TGATCGCAAC GGTGCTCGCG
ACCGCGGTGG CACGCACGGT CGACGGCTAC TCGATCTACT CCGCGCGCCT CGCAGGCGCG
GGCGAGTGA
|
|---|
| Protein sequence | MVKADREHPW HLRRVRSPQP LIRRRLPTGR GATEQPNATG DGDAELTLKF WIFLILTGVG
AGLFGDLMMV ILFNVQHITY HYHIGSFQAA VGRSAPIYRL EMLTLAGAIG GPAWFILSKF
TKGERSEVDD VVWKGEGDLH IRKSLGTSII QEVVIGMGAS LGREAAPKLL GAVSGSYLGR
WGKLSPAQKR LLIACGAGAG LAAVYNVPLG GALFTAEIMM GEVTLPVVLP ALAASVIATY
VGYLYLPDHA TYVGVANYQF HLAQIVFAVI AGPLIGLFSV AFVRLMGLVT HHRFTGRWVL
IGPLLSFSIL GFIGMRYFQL FGNGKDMAHA VFLNQLGSLG LLAALFLLKP IVTAMALGTG
ASGGLFTPTL STGAVLGGFL GGIWSFVMPG AAIGSYAMIG AAAMMGAGMQ APLAGIVLVL
ELTHSGLDLI VPLMIATVLA TAVARTVDGY SIYSARLAGA GE
|
|---|
| |