| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0253 |
|---|
| Symbol | |
|---|
| ID | 8322307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 258338 |
|---|
| End bp | 259630 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644951401 |
|---|
| Product | glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| Protein accession | YP_003108895 |
|---|
| Protein GI | 256371071 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCGA TGATCTTCGA GTCCAACGAA GCGGCGTTCC GTGCCGCGTC CGAACTCATG
GTCGGCGGGG TCAATTCCCC GGTGCGTTCG TTCGCGTCCG TCGGCGGCAC GCCGTATGTG
GTCGAGCGGG GCGAGGGTGC GTGGGTCATC GACGTCGAGG GGCGGCGCTA CCTTGATTAC
GTCCAGTCGT ACGGGGCGGT GATCCATGGT CACGCCGATG CGCGTATCAC GCGCGCGATC
GCCGATCAGG CCGCCCGAGG GACCACCTTC GGTGCACCAA CGGTGGGCGA GATCCGGCTG
GCGAGCGCGA TCGTCGATCG CGTGGCCGGC GTCGAGCGGG TGCGCCTCAC GAGCTCGGGC
ACCGAAGCGA CCATGACGGC CATCCGATTG GCGCGAGGCG TGACCGGACG ATCGCGGATC
GTCAAGTTCG ATGGCTGTTA CCACGGCCAC AGCGACGCGC TGCTCGCGGC CGCTGGATCC
GGGGTGGCCT CGCTGTCGCT CCCGGGGTCT GCCGGGATCC CCGATGGAGC GGTGGCCGAC
ACCATCGTCG TCCCCTACCA GGAGGTGCCC ACGCTCGACG AGCGCGTGGC TGCGGTCATC
GTCGAGCCGA TCGCGGCGAA CATGGGGCTC GTGGCGCCGG AGCCGGGATT CCTCGAGGGC
CTGCGCGCCG AGACCCAGCG CGTGGGAGCG CTGCTCATCT TCGACGAAGT GATCACCGGG
TTCCGCGTGG CGCGCGGGGG TGCGAGCGAG CTGCTCGGCG TGCAACCGGA CCTGTGGTGC
TTCGGGAAGG TCATCGGCGG CGGTCTCCCG ATCGGGGCCG TCGCCGGGCC AGGGACCATC
ATGGATCACC TGGCCCCCGC TGGCTCGATC TATCAGGCAG GCACTCTCTC GGGCAATCCC
GTCGCGACCG CCGCTGGCGC CGTCGCGCTC GAACTCCTCG ACGCCGGGTC GTACCCGCAG
CTCGAGGGGC GCGCACGGGC GCTCGCGACC GGCCTTGCCT CCGTCATCGC CGAGGCGGGG
CTCCCGGTGC AGGTTCCGCA GGTGGCCTCG TTGCTGGGCC TGTTCTTCAG CGACGAACCG
GTGCGTACCT ATGCCGATGC TCGCCGGGCC GTCGGGTCGG GTTGGTACGC CCCGTTCTTT
CATGCGATGC TGCGACGAGG GATCGCGCTC GCGCCAGGCC CGTACGAGAT CCTCTTCCCG
GGACTCGCGC ACAGCGCCGA CGACGTCGAC CGGACGATCG ACATCGCCTC GGCGGCCGCC
CGTGACGCGT TCGTCGCCGG GCCTGTGCGC TAA
|
|---|
| Protein sequence | MAAMIFESNE AAFRAASELM VGGVNSPVRS FASVGGTPYV VERGEGAWVI DVEGRRYLDY
VQSYGAVIHG HADARITRAI ADQAARGTTF GAPTVGEIRL ASAIVDRVAG VERVRLTSSG
TEATMTAIRL ARGVTGRSRI VKFDGCYHGH SDALLAAAGS GVASLSLPGS AGIPDGAVAD
TIVVPYQEVP TLDERVAAVI VEPIAANMGL VAPEPGFLEG LRAETQRVGA LLIFDEVITG
FRVARGGASE LLGVQPDLWC FGKVIGGGLP IGAVAGPGTI MDHLAPAGSI YQAGTLSGNP
VATAAGAVAL ELLDAGSYPQ LEGRARALAT GLASVIAEAG LPVQVPQVAS LLGLFFSDEP
VRTYADARRA VGSGWYAPFF HAMLRRGIAL APGPYEILFP GLAHSADDVD RTIDIASAAA
RDAFVAGPVR
|
|---|
| |