| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0249 |
|---|
| Symbol | |
|---|
| ID | 8322303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 253783 |
|---|
| End bp | 255015 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644951397 |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_003108891 |
|---|
| Protein GI | 256371067 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCTCG TTGCTCTGAG CATCGCGGAA CGTGAGGTCG GTGGCCGGTT TGAGGCGTGT
GCGCTCGACC GCGACCGGAC CGAGCGCCTC GAGGACGGTC TCGCCCGTCT GGTCGCCAAG
GGAGCGATTG TCGAGGCCGC TGTGCTCGCA ACGTGTGCGC GCACCGAGTT GTACCTTGCC
GTGACGCAGT TCCATGCCGC CGTCGAGCAG GCAGCTGGCG TGCTCGCCGA GGTCCTGGAC
GTGCCGCGGA GTCTCGTCGA GCAGCTCGCG ACCGTCCACT TCGGCACCGG CGCGCTCCGT
CATCTCTACC GCGTGAGCGC GGGTATGGAG TCGGTCATCA TCGGCGAGTC CGAGATCGTG
GCTCAGGTGA AGGACGCGAT CGCACGGGCT CAGCGTCGAC GTCTCGCAGG TGGCGAGTTG
ACGCGCGTCT TCGACCGAGC GCTCGAGGTC GCCAAGGACG TGCGCGCGAG TACCGAACTG
ACGCACGGCT CGGCTTCGGT CGTCACGATG GCGACCGAGC TGGCTCTCGA CGGAGCATCC
GCGCGCGACG TGGCGGTCGG GGTTGTCGGC ACCGGTGCGA TCGGATCCGA GGTGGCTCGC
GTGCTCAGCG AACGCGGGGC TTCGGTGACG GTGCTCACCC GTCGGGCAGA CGTCCTGAGT
CAGCAACCCG TCGGCGTCGA GGTCCGAGCC TTCGAGCAGC TCCGGAGCAT CATCGAATCG
TTGGACGCCG TGGTGCTGGC GACCACCACG GATTCGGCAG TGCTCGATGC GTCGATGATG
CCGAGCGGAC ACCCCTTGCG GATCGTCGAT CTGTGTCGGC CTCGTGCTGC CGATCCGGCG
CTTGCCGCCG TGGACGGCGT CAAGCTGGTC GATCTCGAGG AGGTCAACGA ACTCGTCGCG
GCGCAACTGT CGAAGCGGCG TGAGGCGCTC ACCGATGCGG AACTCATCAT CGAGCGGGCG
CTCGCCAACG ACGGAGTGCT GCTCCACGCT GGTGAACTCA ACCCCACCCT CGCTCGTCTG
CACGCGTGGG GTGAGGCGTT GCGCCAGTCG GAGCTCGAGC GCGCGCTCGC TCGCGTCGGC
GACGACGAGA AGGCGAGAGC CGCACTCGAG GAACTGAGCC ATCGTCTGGT TCGCAAGGTG
CTCCACGAGC CGAGCAAGGC CCTGCGTGCT CACGCCTCGT CGGAGGATCT CGGCGCATTG
CTCGCGAGCG TGCGCACGCT CTTCGATCTG TGA
|
|---|
| Protein sequence | MSLVALSIAE REVGGRFEAC ALDRDRTERL EDGLARLVAK GAIVEAAVLA TCARTELYLA
VTQFHAAVEQ AAGVLAEVLD VPRSLVEQLA TVHFGTGALR HLYRVSAGME SVIIGESEIV
AQVKDAIARA QRRRLAGGEL TRVFDRALEV AKDVRASTEL THGSASVVTM ATELALDGAS
ARDVAVGVVG TGAIGSEVAR VLSERGASVT VLTRRADVLS QQPVGVEVRA FEQLRSIIES
LDAVVLATTT DSAVLDASMM PSGHPLRIVD LCRPRAADPA LAAVDGVKLV DLEEVNELVA
AQLSKRREAL TDAELIIERA LANDGVLLHA GELNPTLARL HAWGEALRQS ELERALARVG
DDEKARAALE ELSHRLVRKV LHEPSKALRA HASSEDLGAL LASVRTLFDL
|
|---|
| |