| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0171 |
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| Symbol | |
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| ID | 8322224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 179952 |
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| End bp | 181574 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644951318 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003108813 |
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| Protein GI | 256370989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGGGC TCGCGGGCGC CGCGGTGCTC GCGGCGTGTG GGTCGGCATC GACGTCGTCG
GCGTCCTCGA CGACGAAGGT GTCGCCGACG CTCACCATCG GGGTCGACAA CGGCTCGCCG
ACCCTGCAGG ACGATTTCAA TCCGTTCTCG GGCAACCAGC GCATCGGCAC GACCTACATG
TACGAGCCGC TGGCCTGGGT CAACCCGCTG CAAGGGACGA CGGTCCCGCT GCTGGCGGCG
TCCGAGCACT TCACCAACCC GACCACACTC GTCGTCACGC TGCGCAGTGG AATGAAGTGG
TCGAACGGAG CGCCGATCAC GCCAGCGGAC GTGGTGTTCA CGTTCGACAT GCTCAAGCAG
TACCCGGCCC TCGACGGTGC GGGGATCTGG GATCACGTGT CGTCCGTGAC CTCGAGCGGC
TCGACGATCA CCTTCACGTT CACCGCACCG GATGTGCCGT TCGCCCAGTC GATCCTCGAG
ACGCCGATCG TGCCGAAGTC GGTGTGGTCG TCGGTGTCGA ATCCGGTGAC GTTCACCAAC
ACGAACCCGG TGGTCTCGGG GCCCTTCGTG CTGAAGTCGT TCAATCCGAA CGAGTACGTG
CTCGCGAAGA ATCCCGACTT CTGGGACGCA TCGTCCGTCG AGGTCAAGAC CATCAACTTC
CCAGCGTTGA CGGGCAACCA GACCTCCCAG CTGACGCTCG CACAGGGGGG CTACGATTGG
GCGACGCTCT TCATCCCGGA TGTCCAGAAG GTGTGGGTCG CCAAGGATCC GGCAACCAAC
AAGTACTGGT TCCCGAGCGG CGGTGAGATC ACCCTCTTCT TGAACCTCGC GAAGGCGCCT
TTCTCCTCCG TCGCGTTCCG CCAGGGCATC TCGGCGGCTC TCGATCGTTC CACGATCGCG
ACGAAGGCAG AGGACGGCTA CGTGCCGGTT GCAAGCCAGA CGGGACTCTT GCTGCCCAAC
CTGAAGCAGT GGCTCGATCC CGCGATCCCC AACAGCGGCT ACGTGAGCTA CGACCCAACG
GCGGCGCTCG CCGACTTCGC GAAGGCTGGC TACCACCTCA GCGGCGGCAA GCTGACCGGT
CCGAGTGGTG CCGTCTCCAT GTCGATCATC GTCCCGAACG GCTTCTCTGA CTGGATCGAG
GCAGCCCAGG TGATCAGCCA AGAGCTGGCG AAGGTGGGCA TCTCCGTGAC GCTCCAGACG
CCGGAGTACG CCGCCTACGC GAGCGACCTG TCCACGGGGT CGTTTACCGG AGCCATCGGT
GCCTTCGGCG GTACGGGCAA CCCGTACAAC GACCTCCACG GCCTGCTCGC GGCGTCGCTC
GCCGCACCGC TCGGACAGAC GGCGGCCTCG AACTACGAGC GGTGGGTCAA TCCGACGACG
GAGACCTATC TGCACGCGCT GGCTGCCGCG GTCACGACGA GCGCGCAGCG CAACGCCGTC
TACGGGCTCG AGCAACAGAT GGTGAACGAT GTCCCGGTCG TGGTGCTCTA CCAAGGGGCG
ATCTGGAGCG AGTTCTCGAC GAAGAACTTC GTCGGCTGGC CGTCGGCCCA GGACCCGTAC
GCGCCACCGC AGCCCTACGG TCAAGCGCCG CTGGTCATCA TGACGCACCT CAGGCTTCGT
TAG
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| Protein sequence | MVGLAGAAVL AACGSASTSS ASSTTKVSPT LTIGVDNGSP TLQDDFNPFS GNQRIGTTYM
YEPLAWVNPL QGTTVPLLAA SEHFTNPTTL VVTLRSGMKW SNGAPITPAD VVFTFDMLKQ
YPALDGAGIW DHVSSVTSSG STITFTFTAP DVPFAQSILE TPIVPKSVWS SVSNPVTFTN
TNPVVSGPFV LKSFNPNEYV LAKNPDFWDA SSVEVKTINF PALTGNQTSQ LTLAQGGYDW
ATLFIPDVQK VWVAKDPATN KYWFPSGGEI TLFLNLAKAP FSSVAFRQGI SAALDRSTIA
TKAEDGYVPV ASQTGLLLPN LKQWLDPAIP NSGYVSYDPT AALADFAKAG YHLSGGKLTG
PSGAVSMSII VPNGFSDWIE AAQVISQELA KVGISVTLQT PEYAAYASDL STGSFTGAIG
AFGGTGNPYN DLHGLLAASL AAPLGQTAAS NYERWVNPTT ETYLHALAAA VTTSAQRNAV
YGLEQQMVND VPVVVLYQGA IWSEFSTKNF VGWPSAQDPY APPQPYGQAP LVIMTHLRLR
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