Gene Afer_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0164 
Symbol 
ID8322217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp169989 
End bp171050 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content71% 
IMG OID644951311 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_003108806 
Protein GI256370982 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGCG TCTATGAGCT GGATCGTGCG GCGGTGCGTG CGCTCGTTCC CTGGCCGGAC 
TGGCGTATCG AGCAGCTGTT TCACGGGCTC TACCACGAGG GGCAGCGACT CGAGGCGATC
TCGACGCTGC CGGCTCGGAT GCGAGCCGAG CTCGCGAGCC ACCTCGATCC GGGCCTCACT
GAGCGTCGGC GTGAGCACGC CGACGACGGT GAGACGGTCA AGTTCGCGCT GGAGGCTGCC
GACGGGGCGC TCGTCGAGAC GGTCGTCATG CAGTCGGCGC GTCGCATCAG CGTGTGCGTC
TCGAGTCAGG CCGGTTGCGC GATGGGCTGT CGTTTCTGCG CCACAGGGCA GGCCGGGTTC
GTGCGGCACC TCGGGGTCGG GGAGATCGTC GAGCAGCTCG CGATCGCGCA GCGTTCGGTA
CGCCCGCGAC GTCTCACGCA CGTGGTCTTC ATGGGGATGG GCGAGCCGCT CGCGAACGCC
TCGGTGGCGA TCGAGGCCAT TCGACGCATC CGCGCTGACT TCGGCATCAG CCCTCGGCGC
GTCACGGTGT CCACGGTCGG GATCGTGCCG GGGATCCGAC GCCTTGCGCA CGCAGATCTC
GGCGTCACGC TCGCCGTGTC GCTGCATGCG GCCAACGACG CCGCACGAAG CGACCTCGTG
CCCATGAACC GGCGCTACGG CATCGACGCC GTGCTCGATG CCGCGCAGGA GTTCTCCGAG
CTCACCGGGC GGCGCGTCAC GCTCGAGTGG GCGCTCATCG CCGGCGTGAA CGATCGCGAC
CGTGACGCCA CTGAGCTCGC CGGGCACGCA CGTCGGCTCG CCGCTCACGT CAACCTCATC
CCGCTGAACC CCACACCGGG CTACCCGATG GTGGGCACCG ATCCCGACGG CGTCGCGCGC
TTTGCGCGCC GGCTTCGCTC GCTCGGTGTC AACGTGACGG TTCGCGACAC GCGGGGGCGA
TCCATCGATG CAGCCTGCGG ACAGCTCGCC GCCGACGTCG CTCGCGGCGG CCCGGCCGGC
GCCAGCGCGG TGCGCTTCGC ACGGCGCATG GTCTCGGCCT GA
 
Protein sequence
MASVYELDRA AVRALVPWPD WRIEQLFHGL YHEGQRLEAI STLPARMRAE LASHLDPGLT 
ERRREHADDG ETVKFALEAA DGALVETVVM QSARRISVCV SSQAGCAMGC RFCATGQAGF
VRHLGVGEIV EQLAIAQRSV RPRRLTHVVF MGMGEPLANA SVAIEAIRRI RADFGISPRR
VTVSTVGIVP GIRRLAHADL GVTLAVSLHA ANDAARSDLV PMNRRYGIDA VLDAAQEFSE
LTGRRVTLEW ALIAGVNDRD RDATELAGHA RRLAAHVNLI PLNPTPGYPM VGTDPDGVAR
FARRLRSLGV NVTVRDTRGR SIDAACGQLA ADVARGGPAG ASAVRFARRM VSA