Gene Afer_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0144 
Symbol 
ID8322197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp154521 
End bp155000 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID644951291 
Productflagellar hook capping protein 
Protein accessionYP_003108786 
Protein GI256370962 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGG CAGTGGGTGG TATCGGAGCA AGCGCCGCCG GCGCTACGAC GAGCGCGTCG 
GGTGGACTCG CCAGCCTGAC CGCGAACGAG TTTCTCAACC TCTTGGTCAC GGAGCTGCAG
AACCAGAATC CGCTCTCTCC GATGGACCCG TCGCAGATGG TCTCACAGAC CTCGTCGCTG
TCGGAGGTGG AGCTCCTCTC GACCATCCAG AGTGCGCTCA CCCAGATGGC CTCGAGCCAG
GGGATCCTCA GCGCGAGCAG TCTGATCGGC CAGAGCGTCA CCTATCAGGA CGGCTCCGGC
GAGGTTGCCG GCCAGGTCTC CGGCGTCGGG CAGAGCGCCA ACGGCGTCGT CCTCGATGTC
GGTGGCCAGA GCGTGCCGAT CGCGAACGTC ATCGCCGTCG GCATGGTGCC CTCGGGCGCC
TCGGCGACGG GATCGACGCA GACCGGGTCG ACGACGTCGA CGACCGGGTC GGTCGGCTGA
 
Protein sequence
MTMAVGGIGA SAAGATTSAS GGLASLTANE FLNLLVTELQ NQNPLSPMDP SQMVSQTSSL 
SEVELLSTIQ SALTQMASSQ GILSASSLIG QSVTYQDGSG EVAGQVSGVG QSANGVVLDV
GGQSVPIANV IAVGMVPSGA SATGSTQTGS TTSTTGSVG