Gene Afer_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0138 
Symbol 
ID8322191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp148697 
End bp149710 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID644951285 
Productflagellar motor switch protein FliG 
Protein accessionYP_003108780 
Protein GI256370956 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.902934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA AGGTCGCCGA CCTCACCGGC ACCCAGAAGG CGGCCGCAGT GTTGGTGCAG 
CTCGGGACGA CTCTCGCTGC GCGCGTGCTT CGTCAGATGA GCGAGTCGGA GGCGGTCGCC
CTCACGCTCG AGATCGCCAA GCTGCCGAGC CTCGACAAGG AGACCATCAC CGAGGTGATG
GCCGAGTTCG TCGACTCGGT CATCGCACTC AAGACCGTCG GTCAAGGTGG CGTCGACACG
GCCAAGGAGA TCCTCGCGGC CCGCCTCGGC GATCGTGAGG CTGAAGAGAT CCTCGCCCAG
TTCACCGGTC AGAGCGTGTC GAACCCGCTG GCCTTCCTCG ACCACGTCGA GCCGTTCCAG
CTGGTCAGCT TCCTCTCGAG CGAGCACCCC CAGTCGGTGG CGATCATCCT CGCCAACGTC
CCTCCAGACC TCGCTGCCCA GGTGCTGGCT GCGATGCCCG AGGAGCCGCG CGCGGAGGTC
ACCCGCCGTA TCGCCCTCCT GTCGCGTGTC GACCCGGTCG TCGTCGAGCA GGCGGCCTCC
GTGCTCCAGC GCAAGCTAGC CGGCCTGACG AAGCAGGGGC CGGTCGCCCT GCGCAGTGGG
CTCGCCACGG TGGTCGAGAT CTTGAACAAC GTCGACCAGA GCACGGAGCG ACGCATCCTG
TCGGACCTCG ACTCGCTCGA CCCCGAACTC GCCGATCGCA TCCGTGAGCA GATGTTCGTG
TTCGAGGACA TCATGGTGCT CGACGACCGG ACCCTCCAAC GCATCTTGCG TCAGGTGTCG
CCGAAGGACC TCGCCGTGGC GCTCAAGGGC GTCTCGCCCG AGTTGGTGAA CCGCATCATG
GCGAACATCT CCGAGCGCGC CGCGGAGGAT CTCGCCGAGG AGATCGAGCT GCTCGGCCCC
GTGCGCCTCT CGACGGTCGA GGCTGCCCAG GCACAGATCT TGCGTGCCGT CCGCGAGCTC
GAGGCGGCGG GCGAGATCAC GATTGCCCGG TCCGACGAGG AGCTCGTCCA GTGA
 
Protein sequence
MSTKVADLTG TQKAAAVLVQ LGTTLAARVL RQMSESEAVA LTLEIAKLPS LDKETITEVM 
AEFVDSVIAL KTVGQGGVDT AKEILAARLG DREAEEILAQ FTGQSVSNPL AFLDHVEPFQ
LVSFLSSEHP QSVAIILANV PPDLAAQVLA AMPEEPRAEV TRRIALLSRV DPVVVEQAAS
VLQRKLAGLT KQGPVALRSG LATVVEILNN VDQSTERRIL SDLDSLDPEL ADRIREQMFV
FEDIMVLDDR TLQRILRQVS PKDLAVALKG VSPELVNRIM ANISERAAED LAEEIELLGP
VRLSTVEAAQ AQILRAVREL EAAGEITIAR SDEELVQ