Gene Afer_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0124 
Symbol 
ID8322177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp135583 
End bp135894 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content70% 
IMG OID644951271 
Productmicrocompartments protein 
Protein accessionYP_003108766 
Protein GI256370942 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG GGGTGAGCGG CATCGCGCTC GGCATGATCG AGACTCGCGG TCTCGTGCCG 
GCGATCGAGG CAGCGGACGC GATGACGAAG GCGGCGGAGG TGCGCCTCGT CGGTCGTCAG
TTCGTCGGTG GCGGCTACGT CACGGTGTTG GTTCGGGGTG AGACCGGCGC GGTGAACGCA
GCCGTGCGTG CGGGTGCGGA CGCGTGCGAG CGGGTCGGCG ACGGCCTCGT GGCGGCACAC
ATCATCGCTC GGGTGCACTC CGAGGTGGAG AAGATCCTTC CTGACGGCGA GGACATGGCC
GCCGGGGCGT AG
 
Protein sequence
MATGVSGIAL GMIETRGLVP AIEAADAMTK AAEVRLVGRQ FVGGGYVTVL VRGETGAVNA 
AVRAGADACE RVGDGLVAAH IIARVHSEVE KILPDGEDMA AGA