| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0114 |
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| Symbol | |
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| ID | 8322167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 124213 |
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| End bp | 126771 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951262 |
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| Product | flagellar hook-associated 2 domain protein |
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| Protein accession | YP_003108757 |
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| Protein GI | 256370933 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCGA TCCTGCCAAC CTCATCGACG AGCTCGACGT CGTCGACGTC GAGTGGCTCC
AACGTCTCGA CCTACTCCGA CCCGGGCGGT CCCCCGATCA CGTTCTCCAG CCTGTTCTCC
GGTATCAACA CCCAGGCGAT CATCCAGGCG CTCATGGCCG CCTACGAGCA ACCCCAGGTC
GATCTCGCCA AGCAGATCCA GTCGCTCCAG ACGAACCTGT CGGACTACCA GACCATCGTC
TCGGACCTCA GTTCGCTCCA GACCCAAGCG AACGCTCTGC TCCAGCCGTC ACAGCTCTCC
TCGATGAGCG CGAGTACCTC CGACGCTGCC GTGGCCACAG CAACCGCAGG TCAAGGCGCC
ATCCCGTCGT CCTTGACGTT CAACGTTAAC CAACTCGCCC AGGCCAACAT CCTCGCCTCC
AGCGGCACCG TGTCGTCGCT GTCGTCTCAG GTCGCCTCCG GGAACTTCCT CCTCTCCTCG
AGCGCAGCGG GCGCCGGCGT CACCTCGCTT GCTGGCTCCT CGCTCCAGGT CGGGACGCAC
TCCTTCTCCG TGACGAGCGC GCTCTCGGGC GCCACCGCGA CGGGGACGTC CCCTCTTGCC
TCGTCGATCA CCATCGGCTC GTCCAACGAC ACCATCGCCG CTACCGTCAA CGGCACCGCC
GAGACGTTCA CCATCGCCTC GGGGACCTAC ACGCCAGCTC AGCTCGCCGC CGCGATCTCG
CAGGCGAGTT CGGTCTCGGG AACCCCCTTG CTGCAGGCGC AGGTGAACGC CCAGGGCCAG
CTCGAACTCG GCACGACGCT GCTCGGTTCG AGTGCATCGC TCCAGATCAC CGGTGGTACC
GCACTGTCGA CGTTGGGACT CGCGGCCCAA GCGAGTGCGT CCGTCGGGAC CGCGGGGTCG
GTCACACTCG ATGGCACCGT CACCGCCGTG AACAACGTCC AAGCGGGTCA GACGGTCAGC
CTTGCCGACG GCACCGGGGG GTCGATCACG ATCGGTATCG GATCGTTCGG CCTCAGCCAG
GGCAGCTTCA CCGCTACCGA GGTGGCGGCC GGCAACGGGT CGCTCTCGCA GGTGGTGAGC
AACATCAATG CCGCTGGCGC CGGTGTGACG GCATCAGCGG TCCAAGTCTC GAGTGGTACC
TACGTGCTCC AGCTGGTCTC GAACCAAACG GGCACCGCAT CGGCCATCAC CGTCGAACAG
GCGCCCTTCC AGAGTGCCCT CGGTAGCTTC ACGACCATTG CAGCGGCACA GAATGCCCAG
GTCCAGATCG GTGGCCAGAG TGGTTACCTG GTGAGTTCTC AGACGAACCA GGTCCAGGGC
GTGTTGCCCG GAGTCACGCT CAACTTGGTG TCGGCGCAGC CTCCCGGCTC GGCGCCGGTC
ACCGTGAGCG TCACCCCCGA CGGCAAGACG CTCGCCTCGT CCATCCAGTC GCTCGTCAAC
GCCGCAAACC AGGTGCTCAG CGACATCAAC ACGTACGCGG GCTACAACGA GCAGACCAAC
ACCGGCGGAC CGCTGATGGG CGACTCGACG CTGAACGGGA TCACGAGCCA GGTGCTCGGT
GTCATCGCTC AGACCCTCGG CGAGGGGGGC ATCACCGCCG CCCAAGCCGG CATCACGCTG
AACAAGAACG GTACCATCAG CTTCGACGCG CAAACCTTCG CCCAGCTCTA CGACCAGAAC
CCGACCGCCG TCACGTCACT ATTCGCCCAG TCGGGCACCT TCAACCCATC GAGTTCGACC
TACGCAGGCG ACGTCAGTCT GGTCTACGCG GGTGATGGCA CGCAAGCGGG CTCCTACCAG
GTCGTGGTGA GCCAGTCGGC CACCCAGGCG ACGGACAGCG GGTCCGTGCT CGCGAGCGGA
ACGATCACCA ACGCCGAGAC GCTCACCGTC GCCCAGGGTT CGCAGTCGGT GCAGTACGCA
GCGAGCGCGG GCGAGTCGCT CAGCGCCATC GCCCAGGGCC TCAATGCCGC GTTCGCCCAG
GCAGGCATGG GGATGCAGGC CTCCGTGGTG AGCTCGTCGT CGGGTTCGCA GATCGTGCTC
ACCGCGAGTG CGTACGGGAC CCAGGGCGAC TTCACGGTGA CGACGACGGC GACGGGATCT
GGGCAGACCG GGCTCGCAAC GAGCGCGAAC ACGCCGGAGT CGTTCACCGG CTTGAACGTC
GCCGGGACGA TCAATGGTGT GGCGGCGACC GGGAACGGTC AGGTCCTCGC CGCGCCGACG
ACGGACCCCA CGCTCGCCGG CTTGTCGCTG CAGGTGAGTG CGAGCGGGAT CACGAGTGCG
ACGACCATTG GCTCGTTCGT GTATTCGCCA GGGATCTCGG GCCAGCTCGC CCTCATCGCC
AACGGCGCCA CAGCACCCGT GACCGGGAGC CTCGAGGCGC GCATGAGCGG TATCCAGCAA
CAGATCTCGA TGCTGCAGCA ACAGTACAAC GGCTATACGC CGATGATCCA GAACGAGCAG
AAGATGCTCG AGCAGGAGTA CTCCGCGATG GAGTCACAGC TCGGCTCGCT CCAGAGCGTG
GGCTCGGAGC TCGCCGGGCA GATTGCACAG CTGCCGTAG
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| Protein sequence | MSSILPTSST SSTSSTSSGS NVSTYSDPGG PPITFSSLFS GINTQAIIQA LMAAYEQPQV
DLAKQIQSLQ TNLSDYQTIV SDLSSLQTQA NALLQPSQLS SMSASTSDAA VATATAGQGA
IPSSLTFNVN QLAQANILAS SGTVSSLSSQ VASGNFLLSS SAAGAGVTSL AGSSLQVGTH
SFSVTSALSG ATATGTSPLA SSITIGSSND TIAATVNGTA ETFTIASGTY TPAQLAAAIS
QASSVSGTPL LQAQVNAQGQ LELGTTLLGS SASLQITGGT ALSTLGLAAQ ASASVGTAGS
VTLDGTVTAV NNVQAGQTVS LADGTGGSIT IGIGSFGLSQ GSFTATEVAA GNGSLSQVVS
NINAAGAGVT ASAVQVSSGT YVLQLVSNQT GTASAITVEQ APFQSALGSF TTIAAAQNAQ
VQIGGQSGYL VSSQTNQVQG VLPGVTLNLV SAQPPGSAPV TVSVTPDGKT LASSIQSLVN
AANQVLSDIN TYAGYNEQTN TGGPLMGDST LNGITSQVLG VIAQTLGEGG ITAAQAGITL
NKNGTISFDA QTFAQLYDQN PTAVTSLFAQ SGTFNPSSST YAGDVSLVYA GDGTQAGSYQ
VVVSQSATQA TDSGSVLASG TITNAETLTV AQGSQSVQYA ASAGESLSAI AQGLNAAFAQ
AGMGMQASVV SSSSGSQIVL TASAYGTQGD FTVTTTATGS GQTGLATSAN TPESFTGLNV
AGTINGVAAT GNGQVLAAPT TDPTLAGLSL QVSASGITSA TTIGSFVYSP GISGQLALIA
NGATAPVTGS LEARMSGIQQ QISMLQQQYN GYTPMIQNEQ KMLEQEYSAM ESQLGSLQSV
GSELAGQIAQ LP
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