Gene Afer_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0105 
Symbol 
ID8322158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp112225 
End bp113619 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID644951254 
Productcrotonyl-CoA reductase 
Protein accessionYP_003108749 
Protein GI256370925 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR01751] crotonyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGT TCCTCACCGA GGCTGTGCTC GCTGGCGCGG ATCCCGCCGA GTTGGCGGCG 
ACACCGGTCC CGGACCACTA CCGGGCCTGC TACGTCCAGC AGTCCGACAT CGAGCGTGTT
GCCCACCTCG ATCCTGCCGT ACGCGACCCC GGCACCACCT TGCACATCGG AGATGTCCCC
ATGCCCGAGC TCGGGCCGGA CGAAGTGCTC GTCGCGGTGA TGGCGAGCTC GATCAACTAC
AACACGATCT GGTCGGCGCT CTTCGAACCG GTGCCGACGT TTCAGTTCCT CGCCCGACTC
GGACGCTCAC CGCGGCCGCT CGACCAGCGC CACAACCTGC CCTACCACGT GATCGGATCG
GACGCTGCCG GTGTCATCGT TCGCACCGGA CCCGCGGTAC GCCGCTGGCA GATCGGTGAC
CGTGTGGTCG TGCACTGCAA CGCGGTCGAC GACCAAGACC CGAGCGCCCA CGACGACTCG
ATGCTCGCCA GCGAGCAGCG CATCTGGGGT TACGAGACCA ACTTCGGCGG CTTGGCGGAG
TTCACCATCG TGCGAGCCAA TCAGCTCATG CCGAAGCCCC GCCATCTCAG CTGGGAAGAG
GCGGCCGTCA ATCCCCTCAC CAACTCGACC GCCTACCGCA TGCTCGTCTC GCCCAACGGT
GCCCAGATGC GTCAAGGACA GGTGGTGCTG ATCTGGGGCG CGACCGGTGG GATCGGCTCC
TACGGCGTCC AGTACGTCCT GAACGGCGGA GGCATCCCCG TCGGGGTGGT CTCCTCGCCG
CGCAAGGCAG CGCTGCTCCG ACGCATGGGC TGCGAGTACG TCATCGATCG TTCCGAGCGG
AACTACCAGT TCTGGCGCGA CGACGACACG CAGGACGAAA CGGAGTGGCG ACGCTTCGGC
CAAGACATAC GTGACCTCGT GGGCGAAGAC CCTGACATCG TCTTCGAGCA CCCGGGCCGC
GCGACCATGG GGGCGTCCGT CTACGTCGCC AAGCGCGGCG GCACGATCGT GACGTGCGCT
GCCACGAGCG GACATTGGAT CTCCTACGAC AACCGCCACC TGTGGATGAA GCTGAAGACC
ATCAAGGGCA GCCACTTCGC GAACTATCGC GAGGCGTGGG AAGCCAATCG ACTCATCGAG
CGTGGACGCA TCCAACCGGT CCTGTCGGCC ACGTACCCGC TCGAGGAGGT CGCCGAAGCG
GTTCGCACGG TCCGCCAGAA CCGTCACGAA GGCAAGGTCG GGATCCTCTG CCTCTCGCCC
ACGCCGGGGC TCGGCATCGA CGACCCCGAG GCACGCACCG CGATCGGCGA AGACCGCATC
GCACTCTTCG CGCGCTTTGC GGCCGAGCAA ACGACGGCAC CCGAACAGCG CGGAGGCGAC
GATGGACGAG CCTGA
 
Protein sequence
MPSFLTEAVL AGADPAELAA TPVPDHYRAC YVQQSDIERV AHLDPAVRDP GTTLHIGDVP 
MPELGPDEVL VAVMASSINY NTIWSALFEP VPTFQFLARL GRSPRPLDQR HNLPYHVIGS
DAAGVIVRTG PAVRRWQIGD RVVVHCNAVD DQDPSAHDDS MLASEQRIWG YETNFGGLAE
FTIVRANQLM PKPRHLSWEE AAVNPLTNST AYRMLVSPNG AQMRQGQVVL IWGATGGIGS
YGVQYVLNGG GIPVGVVSSP RKAALLRRMG CEYVIDRSER NYQFWRDDDT QDETEWRRFG
QDIRDLVGED PDIVFEHPGR ATMGASVYVA KRGGTIVTCA ATSGHWISYD NRHLWMKLKT
IKGSHFANYR EAWEANRLIE RGRIQPVLSA TYPLEEVAEA VRTVRQNRHE GKVGILCLSP
TPGLGIDDPE ARTAIGEDRI ALFARFAAEQ TTAPEQRGGD DGRA