Gene Adeh_3981 details

Gene Information

• Locus tag: Adeh_3981
• ID: 3887463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: +
• Start bp: 4594129
• End bp: 4596018
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637865539
• Product: TRAP dicarboxylate transporter- DctM subunit
• Protein accession: YP_467182
• Protein GI: 86160397
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component; [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component
• TIGRFAM ID: [TIGR00786] TRAP transporter, DctM subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTCC GTGAGGGGTC AATCGACTTT CGCGTGACCG CCCCAACCAT CTCCAGCCAC 
GGCGACCCGA ACGCGCAGGG CACGCGCGTC GAGCGCGGCC TCGTCACGTT CCTGCTCGTG 
ACGATGATCC TGCTGCCGGC CGCCTCCACC GTGTCGCGGC GCCTCCTCGG CCGGGAGCTG 
CCCGGCTCGG CCGTGCTCGC GCAGCACATC ACCCTGTGGG TGGGCTTCCT CGGAGCGATG 
CTCGCCACCG CGAGCGGCCG CCACCTCGCC CTCTCCACCC TCGACCTGAT CCCGGTGGGC 
TGGCCGCGCA CCGCGGCCTG GTTCCTCGGG CAGGCGGTCT CCGCCGCGGT CACGGCGCTG 
CTCGCCTGGG CGTCGCTCGA GCTGGTCAAG GTCGAGTGGA CGGGGTTCGG CCAGGTCGCG 
CTCGGCATCA AGGTCGCCTG GAGCCAGCTG GTGATGCCGG TGGGCTTCGC GATCATGGCG 
CTCCGCTTCG CGTGGCGGGC CGGGGCGCCC TGCGAGTCCC TGCGCTGCTG GGCGCTGCGC 
GTCGCCGCCG CGCTGGTCGC GGTGGGCGCG TTCCTGCTCG GGTCGGTGGT GCCCGGCCCG 
GCGCTCACCT GGATCCTCTC GATCCTGGTG CTGCTCGCGT TCCTGCTGGG CGCGCCGGTG 
TTCGTGGCCA TGGCCGGCCT CGCCATGGTG CTGTTCTTCC GCGACGCGGG CGACGCGCTC 
GCGATCGCGG CGGTGCCCAC CGCCACCTTC AACCTGGTCT CCTCGGCGAC GCTGCCCGCC 
ATCCCGCTGC TCACCGCGGC CGGCTACGTG CTCGCCGAGG GCGGCGCGGC GCGCCGGCTG 
GTGCGCGCGT ACAAGGGGCT GTTCGGGTGG ATGCCGGGCG GCGTCGCCGT GATGGCGACG 
TTCGTGTGCG CGCTGTTCAC CACCTTCACC GGCGCGTCCG GCGTCACCAT CCTCGCGCTC 
GGCGGGCTCC TGCTCCCGGC GCTCCTCGAG GACGGCTACC CGGAGGACTT CTCGGTCGGC 
CTGGTCACCG CGGCCGGCTC GCTCGGCCTG CTGTTCCCGC CGTCGCTCCC GGTGATCCTC 
TACGGCGTGG TGGCGCAGGC GCCCATCGAC CACCTGTTCA TCGGCGGGCT GGTGCCGGGC 
CTGCTCATGA TCGTCCTCGT CGCCGCCTAC GGCGTCATCG TGGGCGTCCG GTCGCGCGCG 
CCGCGGCAGC CGTTCCACCC GCGCGAGGCG CTCGCGGCGC TGTGGGACGC GAAGTGGGAC 
CTCGGGCTCC CCACGCTCGT GGTGGTGGCG GTCGGCTCGG GGTTCGCGAC CGTGGTGGAG 
GCCGCCGCGC TCGCCGCCGC GTACGCGCTG GTGGTCGAGC TGGTGGTGTT CCGCTCGATC 
AGCCCGGTCC GCGACCTGCC GCGGGTGCTG GTCCACGCGT CCACGCTGGT CGGGAGCGTG 
GTGATCCTGC TCGGCACCGC GCTCGGGCTC ACCTCCTGGT TCGTGGACGC GGAGATCCCG 
ACCCGGCTGG TGGAGTGGAT GACGGCGCAC GTGCACTCGC CCGCGCTGTT CCTGCTCATG 
CTGAACGCGG TGCTGCTGGT GCTCGGCAGC GTGCTCGAGA TCTACTCGGC CATCGTGGTG 
CTGGCGCCGC TGGTCGCGCC GCTCGGCGTC GCCTACGGCA TCGACCCGAT CCACCTCGGC 
GTGGTGTTCC TCGCGAACCT CGAGCTCGGC TTCCTGTTCC CGCCGATGGG GCTCAACCTG 
TTCCTGTCGG CCTCGCGCTT CAACAAGCCG CTGCCGTACC TCTACCGCAA GGCGTTCCCG 
TTCCTGCTCA TCATGAGCGC GGGCGTCCTC GCCATCACCT ACCTGCCGGC CATCACCACC 
GGCGTGGTGG AGCTGCTCGC CCGCGACTAG 

 

Protein sequence

MPLREGSIDF RVTAPTISSH GDPNAQGTRV ERGLVTFLLV TMILLPAAST VSRRLLGREL 
PGSAVLAQHI TLWVGFLGAM LATASGRHLA LSTLDLIPVG WPRTAAWFLG QAVSAAVTAL 
LAWASLELVK VEWTGFGQVA LGIKVAWSQL VMPVGFAIMA LRFAWRAGAP CESLRCWALR 
VAAALVAVGA FLLGSVVPGP ALTWILSILV LLAFLLGAPV FVAMAGLAMV LFFRDAGDAL 
AIAAVPTATF NLVSSATLPA IPLLTAAGYV LAEGGAARRL VRAYKGLFGW MPGGVAVMAT 
FVCALFTTFT GASGVTILAL GGLLLPALLE DGYPEDFSVG LVTAAGSLGL LFPPSLPVIL 
YGVVAQAPID HLFIGGLVPG LLMIVLVAAY GVIVGVRSRA PRQPFHPREA LAALWDAKWD 
LGLPTLVVVA VGSGFATVVE AAALAAAYAL VVELVVFRSI SPVRDLPRVL VHASTLVGSV 
VILLGTALGL TSWFVDAEIP TRLVEWMTAH VHSPALFLLM LNAVLLVLGS VLEIYSAIVV 
LAPLVAPLGV AYGIDPIHLG VVFLANLELG FLFPPMGLNL FLSASRFNKP LPYLYRKAFP 
FLLIMSAGVL AITYLPAITT GVVELLARD