| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3938 |
|---|
| Symbol | |
|---|
| ID | 3886388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 4546107 |
|---|
| End bp | 4548248 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637865496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_467139 |
|---|
| Protein GI | 86160354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.238271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCC GGCGCGACGC GCTGCTCGTG CTGCTGCGGA TCGCGTTCCG CAACCTGGCC
GCGAGCAAGG TCCGCACCTC CATCATCGGC GCCATCGTGC TCGGCGGCGC GTTCCTGGTG
GTGCTGGGGC TCTCGCTGCT CGACTCGATC GACAAGGGCA TGCGCACGTC GATCCAGGGC
AGCCTGGGCG GCCAGCTGCA GGTGTACGAC GCCCGCTCGG AGGACTCGCT CGAGCTGTAC
GGCGGGCTGC GCGGCGAGTC GCTGCTCGAG CCCATCGAGG ACTTCGCGAA GGTGAAGCAG
GTGCTCTCCG CCGTCCCGAA CGTGGAGACG GTGGTGCCCA TGGGCATCGA CCAGGCCATG
GTCGCCACGG GCAACGTGTT CGACGTGGCG CTGGAGCGGC TCCGCGCCGA CGTGCGGCGC
GTGGAGGGCG GCGACGGCTC GGCGGAGGCG CTGCGCGGCT ACGAGGCGCG CAAGGCGCAC
GTGCGCCGCA TGGTGGGGCT GCTCCGCGAC GAGCTGGGCC AGGCGCGGAG CATCGCCGAC
CTGGAGGGCC GGGACGCGGA GGAGCGGCGG CGGGAGTGGG CCGACCTGAC CCGCGCCGCG
GACGACGGGT TCTGGGCCGG GTTCGACCGC GATCGCTACG GCAACCTCGA GTTCCTGGAG
AACCGGATCG CGAAGCTGTC GATGGACGGC GGCTTCACGT TCATCCGCTA CGTGGGCACC
GACGTGGACG CGTTCTTCCG CGCGTTCCAG CTCGCGCAGG TGGCGGAGGG CGAGATGATC
CCGCGCGGCC GGCGCGGGAT CCTGGTGGGC AAGCAGTACG CCGAGGAGTG GCTGAAGCTC
CGGAACGCCC GCCGCCTCGA CCAGATCAAG GAGGCGCGCG ACCGGCGCGG CCGCCGCATC
GCCGACGACG AGGAGCTGCA GCGCTGGGTG CGCGAGAACC GCGCCGGGCT GAAGGACATC
CTCCTGCAGC TCGACCCGAT CCAGGCGGAG GAGGCCGCCA CCCGGCTGCG CGGCGCGCTC
GGCCCGGCGG CCGCGGGGGA GCAGCTGCCC GCGCTGCTCG CCCGGCTGTT CGACACCGAC
GACGCGAGCT TCGACGCGCG GTACCGGATC TTCTACGACC AGCTCGCCCC GCTGCTGCGC
CTCTACGTCA TCAACGTGGG CGACACCATC ACCATCAAGG CGCCGGCGAA GAGCGGGTAC
TTCAACTCGG TGAACGTGAA GGTCTACGGG TTCATCCAGT TCCGGCAGAT CGAGAAGTCC
GGCATCGCCG GGATGATGAG CGTGATGGAC CTGCAGTCCT TCCGCGACCT GTACGGCTAC
ATGACCCGCG AGCGCGCGGC CGAGATCGAC GCCATCAAGC GCTCGGTGGG CGCCACCGAC
CTGGCGCGCG AGGACGCCGA GGCGGCGCTG TTCGGCGGCG GCGGCGGCGC GCTGGAGGGC
GAGTCGCGCG CCGCGCGCAT CGACGAGGGG CGGCTGCTCG CCGAGCGCCG GGGGGACCGG
CCCGCCGAGG ATCTCTCGGC GCGCGTCTAC TCGCAGGAGG AGATCGACCG CGGCGTGGCG
CTGAACGCCG CGCTGATCCT GCGCGACCCC TCGCGGCTGC GCGACACCCT GCGCGACGTG
CAGGCGGCCT CGGACCGGGC CGGGCTGCAC CTGAAGGTGA TCGACTGGCA GCAGGCCTCG
GGCCTGGTGG GCCAGTTCGT GACGCTGCTG CGGGTGATCC TCTACAGCGC GGTGGTGATC
TTCTTCGCCA TCGCCCTCGT GATCATCAAC AACGCCATGG TGATGGCCAC GCTGCAGCGG
GTGAAGGAGA TCGGCACGCT GCGCGCGATC GGCGCGCAGC GCCGGTTCGT GCTCGCGATG
ATGCTGGTGG AGATCGCCTC GGTGGGCCTG GCGTTCGGGC TGGCCGGCGC GGGCCTCGGC
GGGCTGGGCG TGTGGGCGGT GCGCGCGGCG GGCGGCATCC CCGCCACCTC CGACCTCCTC
AACTTCCTGT TCTCGGGGCC GGCGCTCATG CCCACCCTGG GCGGCGGCAG CGTGGCCGTC
TCGATCGTGG TGGTGGTGGT GGTGAGCGTG CTCTCCGGCT TCTACCCGGC GCTGCTCGCC
ATGCGCGTCA CGCCGGTCGA GGCGATGGCG ACGGAGGACT GA
|
|---|
| Protein sequence | MTGRRDALLV LLRIAFRNLA ASKVRTSIIG AIVLGGAFLV VLGLSLLDSI DKGMRTSIQG
SLGGQLQVYD ARSEDSLELY GGLRGESLLE PIEDFAKVKQ VLSAVPNVET VVPMGIDQAM
VATGNVFDVA LERLRADVRR VEGGDGSAEA LRGYEARKAH VRRMVGLLRD ELGQARSIAD
LEGRDAEERR REWADLTRAA DDGFWAGFDR DRYGNLEFLE NRIAKLSMDG GFTFIRYVGT
DVDAFFRAFQ LAQVAEGEMI PRGRRGILVG KQYAEEWLKL RNARRLDQIK EARDRRGRRI
ADDEELQRWV RENRAGLKDI LLQLDPIQAE EAATRLRGAL GPAAAGEQLP ALLARLFDTD
DASFDARYRI FYDQLAPLLR LYVINVGDTI TIKAPAKSGY FNSVNVKVYG FIQFRQIEKS
GIAGMMSVMD LQSFRDLYGY MTRERAAEID AIKRSVGATD LAREDAEAAL FGGGGGALEG
ESRAARIDEG RLLAERRGDR PAEDLSARVY SQEEIDRGVA LNAALILRDP SRLRDTLRDV
QAASDRAGLH LKVIDWQQAS GLVGQFVTLL RVILYSAVVI FFAIALVIIN NAMVMATLQR
VKEIGTLRAI GAQRRFVLAM MLVEIASVGL AFGLAGAGLG GLGVWAVRAA GGIPATSDLL
NFLFSGPALM PTLGGGSVAV SIVVVVVVSV LSGFYPALLA MRVTPVEAMA TED
|
|---|
| |