| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3499 |
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| Symbol | |
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| ID | 3887723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | - |
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| Start bp | 4017090 |
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| End bp | 4018373 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 637865053 |
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| Product | putative sigma factor |
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| Protein accession | YP_466702 |
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| Protein GI | 86159917 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.371795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCTC GCGCGGACGC GCACCGCGCG GTGCACGCGG TGTTCCGCAT CGAGGCGCCC
CGGCTCATCG CCGGGCTGGC GCGGATGGTG CGCGACGTCG GGCTGGCGGA GGAGCTGGCG
CAGGACGCGC TGGTCGCGGC GCTGGAGCGG TGGCCGGAGT CGGGCGTCCC GGAGAACCCG
GGCGCCTGGC TCATGGCCAC CGCGAAGCGC CGCGCGGTGG ACGAGCTGCG CCGGAAGCGC
ATGGTGGAGC GCAAGCACGA GGCGCTCGGG CCGGATCCGG AGGCGCTCGG GCCCGCCGCG
CCGCCCTCGC CCGACGCGGC GGTGGACGAG CCGGTGCGCG ACGACCTGCT GCGGCTGGTG
TTCATCGCCT GCCACCCGGT GCTCTCGCGC GAGGCGCGCA CCGCGCTCAC GCTCCGGCTG
CTGGGCGGCC TCACCACCGA GGAGATCGCG CGCGCGTTCC TGCAGCCGGA GCCCACGGTG
GCGCAGCGCA TCGTGCGGGC GAAGCGCACG CTGGCCGAGG CGCGGGTGCC GTTCGAGGTG
CCGCGCGGCG CGGACCTGCA GGCGCGGCTG GGGTCGGTGC TCGAGGTCGT GTACCTCGTG
TTCAACGAGG GCTACACCGC CACGGCGGGC GACGACTGGA TGCGCCCGGC GCTGTGCGAG
GACGCGCTCC GCCTCGGCCG CATGCTGCAG GCGCTGGTGC CGGACGCGGC GGAGGTCCAC
GGGCTGGCGG CGCTCATGGA GCTGCAGGCC TCGCGCGCCG CGGCGCGGGT GGGGCCGTCG
GGTGAGCCGG TGCTGCTGCT GGAGCAGGAC CGGGGCCGGT GGGATCGGCT GCTGATCCAG
CGCGGGCTGG CGGCGCTGGA GCGCGCGGAG GCGCTCGGCG GCGCGCTCGG CCCCTACGCG
CTGCAGGCGG CCATCGCGGC CTGCCACGCC CACGCCCGCA CCGCGGCCGC GACCGACTGG
CGGCGCATCG CGGCCCTCTA CGACGCGCTG GCGGAGCTGA CCCCGTCGCC GGTGGTCGAG
CTGAACCGGG CGGTGGCGGT GGCGATGGCG TTCGGCCCGG CGGCTGGGCT CGAGCTGGTG
GACGCGATCG CGGACGAGCC GTCGCTCCGT CGCTACCACC TGCTGCCCAG CGTGCGCGGC
GACCTGCTCT TCCGCCTCGG TCGCCACGCG GAGGCCCGCG CCGAGCTGGA GCGCGCCGCC
GGCATGACCC GCAACGCCCG CGAGCGCGCG CTCCTCCTCG AGCGCGCGGC GGCGTGCGGG
CGGGGGTCGT CGCGAATCGG GTGA
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| Protein sequence | MTARADAHRA VHAVFRIEAP RLIAGLARMV RDVGLAEELA QDALVAALER WPESGVPENP
GAWLMATAKR RAVDELRRKR MVERKHEALG PDPEALGPAA PPSPDAAVDE PVRDDLLRLV
FIACHPVLSR EARTALTLRL LGGLTTEEIA RAFLQPEPTV AQRIVRAKRT LAEARVPFEV
PRGADLQARL GSVLEVVYLV FNEGYTATAG DDWMRPALCE DALRLGRMLQ ALVPDAAEVH
GLAALMELQA SRAAARVGPS GEPVLLLEQD RGRWDRLLIQ RGLAALERAE ALGGALGPYA
LQAAIAACHA HARTAAATDW RRIAALYDAL AELTPSPVVE LNRAVAVAMA FGPAAGLELV
DAIADEPSLR RYHLLPSVRG DLLFRLGRHA EARAELERAA GMTRNARERA LLLERAAACG
RGSSRIG
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