| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3024 |
|---|
| Symbol | |
|---|
| ID | 3889180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3434054 |
|---|
| End bp | 3435733 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637864573 |
|---|
| Product | Acyl-CoA dehydrogenase, type 1 |
|---|
| Protein accession | YP_466230 |
|---|
| Protein GI | 86159445 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0869266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TCCTCCAGGA TCCCCCGGTC CTGCCGCACG CCTTCGACGC CGACCCGCTC
CTGCAGGAGT ACCTCGCGAG GACGCTGCCG CCCGACGTGC TGTCCGCGAT CTCCCCGGAG
CTGCGCGAGC TGGGCGCGCT CGCCTCCGGC CCGCTCGCAG CGCAGCAGCT CGCGGAGCGC
CTGGTGGAGC CCACGCTGGT GCAGTGGGAT CCCTGGGGTC GGCGCGTGGA TCGCATCGAG
CCGACGCCGC TGTGGCGCGA GGCGGCCCGG CTCGCCGCGC GCCACGGGCT GGTGGCCGCG
GCCTACGAGC GGCGCCACGG CCCGCACTCG CGCGTGCACC AGCTGGCGAT GGTGTACCTG
CTCGAGCCGT CCATGGACGT GTACGCGTGC CCGCTCGCCA TGACCGACGG GGCGGCGCGC
ACGCTGCTCG ACCTCGCCCC GCGGGCGCTG GTGGAGCGGG CCGTCCCGCG GCTCACCTCG
CGCGACCCGG CGCGCATGTG GACGAGCGGA CAGTGGATGA CCGAGCGGGC CGGCGGCTCG
GACGTGTCGG GCACGGAGAC CGTGGCCCGC CGCGACGGCG AGGCGTTCCG GCTCTGGGGC
ACGAAGTGGT TCAGCTCCGC CACCACCGCC GAGATGGCGC TCGCCCTGGC GCGGCCCGAG
GGCAACCCGC CGGGCTCGGC GGGCCTGGCC CTGTTCTACC TGGAGACGCG CGGGCCGGAC
GGCGCCTCCA ACGGGATCCT CGTGAACCGG CTGAAGGACA AGCTCGGGAC GCGCAAGCTC
CCCACCGCCG AGCTGACGCT GGAGGGGGCG CTCGCGCAGC CGGTGGCGGG GACGTCCGGC
GGCGTCCGCG CGATCACCCC CATGCTGAAC GTGACCCGCA CCTGGAACGC GCTCGTCGCG
GCCGCGTACA TGGCGCGCGC GGTGGCGCTG GCCCGCGACT ACGCGGGGCG GCGGCGCGCC
TTCGGGACGC CGCTGCGGGC GCGCCCGCTC CACGCCGACA CGCTGGCAGG GCTCGAGGCC
GAGCGCGAGG CCGGGTTCCT GCTCGCGTTC CGCGCGGTGG AGCTGCTCGG CCGCGCCGAG
GCGGGCGAGG CCGACCCGGG CGCGCGGGCG CTGCTCCGCG CGGTGACGCC GCTCGCGAAG
CTCACCACCG GCAAGCAGGC GGTGGCGGTC GCCTCGGACG CGGTGGAGGC GTTCGGCGGC
GCCGGCTACG TGGAGGACAC CGGCCTGCCG CGGCTGCTGC GCGACGCGCA GGTGCTGCCG
ATCTGGGAGG GGACCACCAA CGTCCTCGCG CTCGAGGCGC AGCGCGCGCT CGCGGCGGAG
GGCGCGGCCG AGGCGCTCGC GGCGGAGATC CAGGAGCGGC TCTCGCAGGC GCGCGACCCG
TCGCTCCGCC CGGCGGTGCA GGCGGCCACC GGCGCGCTGG CCCGGGCGCG GGCGGCGCTC
GCGGGAGGCG ACGCGCCGGA GCTGCGGGAG GCGGGCGCGC GCCGCCTGGC GCTCACGCTC
GGGCGGACGC TCGCGCTCGC CCACCTCGCC GCGCACGCGC AGTGGGCGCT CGACGCCGGG
CGCGGCCGGC GCGCGGCGGC CGCGGCGCGG CGCTTCGCCC GCAACGGGGT GGACCTGCTC
GGCCCCGCCG GCGAGGACCT GGAGGACTCG GCGCTGCTCG TCGCCGCGAC GGACGCCTGA
|
|---|
| Protein sequence | MTDFLQDPPV LPHAFDADPL LQEYLARTLP PDVLSAISPE LRELGALASG PLAAQQLAER
LVEPTLVQWD PWGRRVDRIE PTPLWREAAR LAARHGLVAA AYERRHGPHS RVHQLAMVYL
LEPSMDVYAC PLAMTDGAAR TLLDLAPRAL VERAVPRLTS RDPARMWTSG QWMTERAGGS
DVSGTETVAR RDGEAFRLWG TKWFSSATTA EMALALARPE GNPPGSAGLA LFYLETRGPD
GASNGILVNR LKDKLGTRKL PTAELTLEGA LAQPVAGTSG GVRAITPMLN VTRTWNALVA
AAYMARAVAL ARDYAGRRRA FGTPLRARPL HADTLAGLEA EREAGFLLAF RAVELLGRAE
AGEADPGARA LLRAVTPLAK LTTGKQAVAV ASDAVEAFGG AGYVEDTGLP RLLRDAQVLP
IWEGTTNVLA LEAQRALAAE GAAEALAAEI QERLSQARDP SLRPAVQAAT GALARARAAL
AGGDAPELRE AGARRLALTL GRTLALAHLA AHAQWALDAG RGRRAAAAAR RFARNGVDLL
GPAGEDLEDS ALLVAATDA
|
|---|
| |