Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1284 |
Symbol | |
ID | 3888678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1489201 |
End bp | 1491036 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637862813 |
Product | type II secretion system protein E |
Protein accession | YP_464495 |
Protein GI | 86157710 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.417466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAAGGA CCTACCGCGC TACCGACTAC ACCCTGGAGT TCGTGGCCGA TCTCCTCGCC AGGGAGGGGA TCCTCACCGA CGACGCGCGC CGCACCGCCA CCGCCCGCGA GGGCGTGCAG CGCGCGCGCC TGCTCCGCGA CGGCGCCTCC CGCAGCGGCG GGCGGGCGCT GCGGCGCGCC GAGCTCTCGC CGATCGAGGT GCTCGCGTCG TTCGAGTTCC CGGACGCCCG GCGCGACGCC GAGACCGTGG ACGAGGACAA GGCCACGCAG GCGGTGGCGA AGGCGGTGGG GATCCCCTAC CGCAAGATCG ACCCGCTGAA GCTCGACGCC CAGCTCATCA CCCGGACGCT GTCGCGCCCC TTCGCGCGCA AGCACGCGGT GCTCCCGCTG GAGCGCCGCA ACGGCTCGCT GGTGGTGGCG GCCGCGAACC CGTTCGACCG CGAGCTGCTC GAGAACCTGC GCGGCCTGAC CGGCGCCGAG GTCGAGCCGG TCCTCTCCTC GCCCTCCGAC ATCCACCGGG CCATCGCCGA GGTCTACGGC TTCCGCCAGC AGATCTCGCA GGCGCGCGTC GAGCTGGAGG GCGGCGGCGG CGCCCCGGAC GTCACCAACC TCGAGCAGTT CGTGAACCTG TCCGGCATCG ACGCGCTGGA GGCGTCGAGC GAGCCGGTGG TCGCGGCGGT CGAGTACCTG CTGCACTACG CGTTCGAGCA GCGCGCCAGC GACATCCACC TCGAGCCGCG CCGGGAGGAG TCGATCATCC GCATGCGGAT CGACGGGGTG CTCCACCCGG TCCACCGCAT CCCGAAGGCC GTGCACGGGG CCATCGCCAA CCGGTTCAAG ATCATGAGCC GGCTCGACAT CGCGCTGAAG CGCCCGCAGG ACGGGCGCAT CCGCACCGCC CGCGGCGACG CCGAGATGGA GCTGCGCGTC TCCACCGTCC CCACCACCTT CGGCGACAAG GTGGTGATCC GCGTGCTCGA CCCGACGGTG CTGGTGCGCG ACCTCTCCGA GCTGGGGTTC CTCCCGGACG AGCGCGACCA GTTCGAGCGC TGGCTGCTCC GCCCGCACGG GCTGGTGATC GTGACCGGCC CCACCGGCAG CGGGAAGACC ACGACCCTCT ACTCCGCGCT GCAGGCGCTC GCGTCGCCGG AGGTGAACGT CGTGACCATC GAGGATCCCA TCGAGATGGT CCACGAGGAC TTCAACCAGA TCGCCGCGAA CCAGAAGACC GGCACCGGCT TCGCCGAGGC GCTGCGCCAC GTGCTGCGCC AGGATCCGGA CGTGGTGATG GTGGGCGAGG TGCGCGACGC CGAGACCGCC ACCCAGGCGG TGCAGGCGGC GCTCACCGGG CACATGGTGC TGACCACGCT GCACACGAAC GACACGGTCA GCGCGGTGGC GCGCCTGCGC GACCTGGGCG TGCCGAGCTT CCTCATCGCC GCCACGCTCA CCGGCATCGC CGCGCAGCGG CTGGTCCGGC AGGTGTGCCC GTCCTGCGCC GAGGACGTGC CGCTCACCGC CGACGAGGTG CACGCGCTGG GCGTGCCGCA CCCCGAGGAC CACGCCGGCA AGCTGCTGGC CCGCCGGGGC CGCGGGTGCC CCAAGTGCCG GTTCACCGGC TACTACGGGC GGAGCGGCAT CTTCGAGGTC CTCCCGGTCA ACGCGCGGCT GCGCCACCTG GTGGCGGAGG GCGCCACGCC CGAGGTGCTG CTCCGCACCG CCCGGCAGGA CGGGCTGCGC CCGCTGCGCG ATCACGCGGT CCGCAAGGTG GCCGCGGGCG TCACGTCCTT CGAGGAGGCG ATGCGCGCCA CCGCCGACGC CGAGGCGGCG CCGTGA
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Protein sequence | MPRTYRATDY TLEFVADLLA REGILTDDAR RTATAREGVQ RARLLRDGAS RSGGRALRRA ELSPIEVLAS FEFPDARRDA ETVDEDKATQ AVAKAVGIPY RKIDPLKLDA QLITRTLSRP FARKHAVLPL ERRNGSLVVA AANPFDRELL ENLRGLTGAE VEPVLSSPSD IHRAIAEVYG FRQQISQARV ELEGGGGAPD VTNLEQFVNL SGIDALEASS EPVVAAVEYL LHYAFEQRAS DIHLEPRREE SIIRMRIDGV LHPVHRIPKA VHGAIANRFK IMSRLDIALK RPQDGRIRTA RGDAEMELRV STVPTTFGDK VVIRVLDPTV LVRDLSELGF LPDERDQFER WLLRPHGLVI VTGPTGSGKT TTLYSALQAL ASPEVNVVTI EDPIEMVHED FNQIAANQKT GTGFAEALRH VLRQDPDVVM VGEVRDAETA TQAVQAALTG HMVLTTLHTN DTVSAVARLR DLGVPSFLIA ATLTGIAAQR LVRQVCPSCA EDVPLTADEV HALGVPHPED HAGKLLARRG RGCPKCRFTG YYGRSGIFEV LPVNARLRHL VAEGATPEVL LRTARQDGLR PLRDHAVRKV AAGVTSFEEA MRATADAEAA P
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