| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0645 |
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| Symbol | |
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| ID | 3887434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | + |
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| Start bp | 742821 |
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| End bp | 745469 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637862166 |
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| Product | type II and III secretion system protein, secretin |
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| Protein accession | YP_463858 |
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| Protein GI | 86157073 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCC GCCTGAAGCC CATCGTCGGC CTGCTCCTGT GGGGCGCGAT CGGCGTCGCC
TCCGCTGCGG AGCCGAACGT CATCCGGGGG ATCGAGGTCG GGCAGCGCGA GGGCGCGCTC
GAGCTCGAGA TCCGCGGCTC GCGGGCCCCG TCCTACTCCG TGTTCAAGCT CCAGGACCCG
CCGCGGCTGG TGGTGGACCT GGCCGGCGCC GACGTCTCCG GGGTGACCTC GCCCATCCAG
GTCGGCAAGG CCGGCGTGCT CGCGGTGAGC ACGGCACAGT ACAAGGACGA GCGCAGCGCG
GTCGGCCGCG TGATCATCGC GCTCGACGGC GCGCGCCGCT ACGACGTGGC GCCGCGGGGT
GACGCGGTGG TGGTGCGCGT GCTGGAGGCC GAGGCCGCGA GCGTCCCCAC CCAGGCGACC
GCCTCCGCGC CGAAGGCTCC GGCCCCCGCG GCCGCGCCGC CCGCCGCCCC CGCGTCCTCC
GGCGACGACC ACCTCGTCGC GCACCGCGTG GACGAGGGCC CAGCCGGCAC CGCTACCCGG
ATCACGGGCG TCCGCGCTGC CGGAGGCCAG CTCGTCATCG CGACCGACGG CCAGGCCGGC
CGCCTCGAGA TCCTCGAGCT GCGCGACCCG GCGCGCCTCG CCATCGACGT CCACGGCGTC
TCCGGCGCGC CGCGGGCGCC GGTGAAGGTG CGCGGCGCGT TCTCGCAGGT CCGCTTCGGG
CGCGACGCGG GCAAGGTGCG CGTCGTCCTC GACGCGTCCG GCGCGCTGCC GAGGTACGAG
GTGAAGCGCG TGGCCGGCGG CGTGGCCGTG GTCACCTCTG GCGCCACCGT GGCGGCTGCC
GAGCCGGCGC GCAAGGCCGT GCCGGCGCCC CGCGTCGAGC CCGTCGCGCC GGCGGCCGCG
CCCGCGGCGC CCGGCCTGGC GCGCATCGGC GACGTCCGCT TCGCGAGCGC CGGCGGCGGC
GCCCGTATCG ACATCTCCGG CAAGGCGCCG TTCGTCATCT CGCGGCCCGA CGCGCACACG
GTGGTGCTGA CGCTGGACGG CGCGCAGCTC CCGCGCGCGC TGGAGCGCTC CCTCGACACC
AGCGCCTTCC GCGGCCCGGT GGCGATGGTC TCCTCCTTCA ACCAGCCGCA GACCGGGCAG
GTCCGCATCG TGGCCAGCCT GCGCGGCAAC GCCACCGACC GGATGATCGA GACGCGCGAC
GGGCTCGCCT GGACGTTCTC CGAGGCCGGT GAGGCGGCGG CAGAGGCCGC GGCGCCCGCC
GCGCCGGAGC AGGCCCAGGC CGCCGACGCG AAGGTGGCGG GCTTCGCCGC CGAAGCCCCG
GCGTACGCCT CCTCGGGCGC GCCCCAGGCG CGCGGCTACA CCGGCCGCCG GATCACCCTC
GACTTCCACG ACATCGAGAT CCGCAACCTG CTCCGGCTCA TCGCCGATGT CTCCAAGAAG
AACATCGTCG TGGCCGACGA CGTGTCCGGC AAGGTCACCG TCTCGCTCCG CAACGTGCCC
TGGGACCAGG CGCTCGACCT GGTCCTGCGG TCCAAGGGGC TGGGGAAGGA GGAGATGGGC
AACGTCATCC GGATCGCGAA GTTCGAGGCC ATCGCCAAGG AGCAGGCGGC GAAGGCGGAG
GCCGAGAAGG CGCGCATCCC GCTCATCCCG CTGAAGGTGC GAATCATCCC GGTGAACTAC
GCGCGGGCGA ACGACGTGGC GAGCCGGGTG AAGGACGTGC TCTCCGAGCG CGGCTCGGTC
TCCACCGACG AGCGCACCAA CGTGCTCATC GTGAAGGACA TCCCCGAGGC CCTGGTCCGC
GCCGAGGGGC TGGTGCGGAA CCTCGACACC GAGATCCCGC AGGTGCTCAT CGAGAGCCGC
ATCGTCGAGG CGTCCTCGAA CTTCAACCGC CAGCTCGGCG TGCAGTGGGG CGGCAACGCC
TCGTTCACGC AGGCCACCGG CAACCCCACC GGCGTCGCGT TCCCGAACAA CGTCTCGGGC
GCCGGCGCCG CCGGCCAGGC GCCGAACCAG GGCACCTCGG CCACCCCGAA CTACGCCGTC
AACCTCCCGG CCGCCATCGG CCAGGGCGCC GGCGGCGGCA TCGGCCTGGT GCTCGGCTCC
GCGAACGGCG CGTTCAACCT GAACCTCCGC CTCTCCGCGC TCGAGAACAA CGGCGTGGTG
AAGACCATCT CCTCGCCCAA GATCGCCACC ATCGACAACA AGGAGGCGAC CATCGGGCAG
GGCATCTCCA TCCCGTTCTC GCAGACCTCC GCGTCGGGCG TGAACACGAC GTTCGTGGAG
GCGAAGCTGG AGCTGAAGGT CACGCCGCAC GTCACCGCCG ACGGCTCGAT CCTCCTCAAG
ATCAAGGCGA CCAACAACGC GCCGAACTCG TCCCTGACCG GCTCGAACGG GCAGCCCTCG
ATCTCGAAGC GCGAGGCGGA GACCGAGGTC CTGGTGAAGG ACGGCGAGAC CACCGTCATC
GGCGGCATCT ACACACGCTC CACGGCGTCG AAGACCGCCG CGGTGCCGTT CCTCAGCAAG
ATCCCGCTGC TCGGCTTCTT CTTCCGGAGC GACACGAACA CGGACGACCA CACCGAGCTG
CTCATCTTCA TCACGCCGCG CATCCTGAAC CGGCAGCCGG CGACGGCCGC GGCGGCCGCG
AGCAACTAG
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| Protein sequence | MTSRLKPIVG LLLWGAIGVA SAAEPNVIRG IEVGQREGAL ELEIRGSRAP SYSVFKLQDP
PRLVVDLAGA DVSGVTSPIQ VGKAGVLAVS TAQYKDERSA VGRVIIALDG ARRYDVAPRG
DAVVVRVLEA EAASVPTQAT ASAPKAPAPA AAPPAAPASS GDDHLVAHRV DEGPAGTATR
ITGVRAAGGQ LVIATDGQAG RLEILELRDP ARLAIDVHGV SGAPRAPVKV RGAFSQVRFG
RDAGKVRVVL DASGALPRYE VKRVAGGVAV VTSGATVAAA EPARKAVPAP RVEPVAPAAA
PAAPGLARIG DVRFASAGGG ARIDISGKAP FVISRPDAHT VVLTLDGAQL PRALERSLDT
SAFRGPVAMV SSFNQPQTGQ VRIVASLRGN ATDRMIETRD GLAWTFSEAG EAAAEAAAPA
APEQAQAADA KVAGFAAEAP AYASSGAPQA RGYTGRRITL DFHDIEIRNL LRLIADVSKK
NIVVADDVSG KVTVSLRNVP WDQALDLVLR SKGLGKEEMG NVIRIAKFEA IAKEQAAKAE
AEKARIPLIP LKVRIIPVNY ARANDVASRV KDVLSERGSV STDERTNVLI VKDIPEALVR
AEGLVRNLDT EIPQVLIESR IVEASSNFNR QLGVQWGGNA SFTQATGNPT GVAFPNNVSG
AGAAGQAPNQ GTSATPNYAV NLPAAIGQGA GGGIGLVLGS ANGAFNLNLR LSALENNGVV
KTISSPKIAT IDNKEATIGQ GISIPFSQTS ASGVNTTFVE AKLELKVTPH VTADGSILLK
IKATNNAPNS SLTGSNGQPS ISKREAETEV LVKDGETTVI GGIYTRSTAS KTAAVPFLSK
IPLLGFFFRS DTNTDDHTEL LIFITPRILN RQPATAAAAA SN
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