Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2118 |
Symbol | |
ID | 8492127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 2104613 |
End bp | 2105299 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646360107 |
Product | PSP1 domain protein |
Protein accession | YP_003240045 |
Protein GI | 260893948 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000276409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCTTGG CCGTAGGGGT GCGCTTTCGC AGAGCGGGAA AGATCTATTA CTTTGACCCG GGTTTTTTAA CCCTCAAGCC GGGGGACCGG GTGGTGGTGG AAACGAGCCG GGGGATGGAG CTCGGCTGGG TGGTTAAGGG TCCGGTGGAG GTCGACATTG ATCCTGCCGA GCTTAAGCCG GTGCTTCGCC TGGCCACTCA AGAGGACATG CGCACTTGGC GAAAGCTCCT CGAAAGGGAG CGGGAAGCCA AAGAGATCTG CAAGGACAAG ATTGCCGCCC ACGGCCTGCC CATGAAGCTG GTGGACGTGG AGTACACTTT GGACGGCAGC AAGATCGTCT TTTACTTCAC GGCCGAGGGA AGGGTGGACT TCCGGCAGCT GGTGCGGGAC CTAGCCTCGG TCTTCCGCAC CCGGATAGAA CTCCGGCAGA TAGGGGTGCG CGACGAGGCC AAGTTCATAG GGGGGCTCGG TCCCTGCGGC CGGGAGCTGT GCTGCGCCAC CTGGCTTACG GAGTTCGCCC CCATCTCTAT AAGACTTGCC AAGGGACAAA ACCTGGTACT CAACCCGGCT AAAATTTCGG GGGTGTGCGG GCGGCTGATG TGCTGCCTAC GCTTCGAGAT GGAGAACTAC TGCCTGGCGG AGGAAAACGG TGTCGAGGAG CTCACCGGGG AGGAGAACCT TTCGTGA
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Protein sequence | MTLAVGVRFR RAGKIYYFDP GFLTLKPGDR VVVETSRGME LGWVVKGPVE VDIDPAELKP VLRLATQEDM RTWRKLLERE REAKEICKDK IAAHGLPMKL VDVEYTLDGS KIVFYFTAEG RVDFRQLVRD LASVFRTRIE LRQIGVRDEA KFIGGLGPCG RELCCATWLT EFAPISIRLA KGQNLVLNPA KISGVCGRLM CCLRFEMENY CLAEENGVEE LTGEENLS
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