| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1876 |
|---|
| Symbol | |
|---|
| ID | 8491880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1874933 |
|---|
| End bp | 1875799 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359864 |
|---|
| Product | pantoate/beta-alanine ligase |
|---|
| Protein accession | YP_003239807 |
|---|
| Protein GI | 260893710 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTGG TAAAGCGACT TTCGGACCTG CGCTCCTGGG TGGCGGCTAC CAAGGCCCGG
GGGGAAAAAA TAGGTTTCGT TCCTACCATG GGCTTCCTGC ATGAAGGGCA TCTGGCCCTT
ATCCGCCAGG CGCGGTCCGA CCAGGAAGTG GATAGAGTGG TAGTGAGCAT CTTCGTCAAT
CCTTTACAGT TCGGCCCCCG GGAGGATTAC CGTGAATATC CCCGGGACCT GGAGCGGGAC
CGGAGGCTGG TAGAAGAAGC CGGCGCCGAC CTTCTCTTCG CGCCCTCAGT GGAGGAAATG
TACCCTTCGG GTTTTGCTAC CTACGTGGAG GTTACCGGGC AGCTAACCTC GGTGCTCTGT
GGCAGGTCGC GCCCCGGGCA CTTCCGGGGG GTAGCCACGG TGGTGGCCAA GCTTTTCAAC
CTCGTATGCC CCGACTGCGC TTACTTCGGC CTTAAAGATG CCCAGCAGGT GGCGGTCATA
AAGCGGATGG TGGAGGATCT CAACTTCCCG GTGAAGATAA AGGTGCATCC GACGGTGCGC
GAGGCGGACG GACTGGCCCT GAGCTCCCGC AACACCTACC TCAGCCCAGA AGAGAGAAAA
GCGGCCACGG TGCTCTTTAG GGCCCTTAAG GAGGCCGAAG AGGCGGTGAA GGCGGGAGAA
AGAGAGGCCC GTGTCTTGCA AGAGAAGCTG AGCCGCACCA TCCAGGCGGA GCCTCTGGCC
CGGCTCGATT ATGCGGAGAT TGTGAGCTGG CCCGACCTTG AGCCGGCGAC CGTCCTTTTG
CCGGGGATGA CCTACCTCCT GGCGGTGGCC GCCTACTTCG GCCGGGCCCG CCTCATCGAC
AACCTCCTGG TGGAGGTGCA GGGGTAA
|
|---|
| Protein sequence | MKVVKRLSDL RSWVAATKAR GEKIGFVPTM GFLHEGHLAL IRQARSDQEV DRVVVSIFVN
PLQFGPREDY REYPRDLERD RRLVEEAGAD LLFAPSVEEM YPSGFATYVE VTGQLTSVLC
GRSRPGHFRG VATVVAKLFN LVCPDCAYFG LKDAQQVAVI KRMVEDLNFP VKIKVHPTVR
EADGLALSSR NTYLSPEERK AATVLFRALK EAEEAVKAGE REARVLQEKL SRTIQAEPLA
RLDYAEIVSW PDLEPATVLL PGMTYLLAVA AYFGRARLID NLLVEVQG
|
|---|
| |