Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1720 |
Symbol | |
ID | 8491720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1711516 |
End bp | 1711983 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646359715 |
Product | hypothetical protein |
Protein accession | YP_003239662 |
Protein GI | 260893565 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAGG GGTTTTGGGA AGAGTGTGGC TTTACCCTGG TGGAGGCGGT GGTGGCGCTT GCCATCTTCT CCATGATCTC CGTCGCTCTC TTCTACCTGA TGGCCGGGAG CTACCGCAGC TACTGGCGGG AGGTCCAGCA ACAGGAGGTG GAGGCCAACC TCCGCCAGGC GCTCGACCGC ATAAGCCTCA GAGTGCGGCA GGCGGAGAAG ATAGAGAAGA TCGATCCCCA GAACCCTTCT ACCGGTATCA TAGTGACCCT CCCGGGCGGC GCGAGCTACA CCTACGCTTA CGACCCGGCC AAGAAAGAGC TTAAAGAGAA CGGCCAGCCC GTAGCCAGCC ATATAACTGG GGTGGAGTTT AGCGTCCGGG AGGGCACGGT GAGTGTTTAT TTGGAGGGGG AGTATTTGGG CTCGGGCAGG TTAGCGCTTT CTACCCAAGT GCGCACGCGG GTGGGTGAGC AAGGATGA
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Protein sequence | MRKGFWEECG FTLVEAVVAL AIFSMISVAL FYLMAGSYRS YWREVQQQEV EANLRQALDR ISLRVRQAEK IEKIDPQNPS TGIIVTLPGG ASYTYAYDPA KKELKENGQP VASHITGVEF SVREGTVSVY LEGEYLGSGR LALSTQVRTR VGEQG
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