| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1659 |
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| Symbol | |
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| ID | 8491655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1646933 |
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| End bp | 1647844 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646359651 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003239602 |
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| Protein GI | 260893505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGGGG TGCTCAACGT GCTCAAGCCC CCCGGAATGA CCTCGCACGA CGTGGTGGAT
TGGCTGCGCC GCCTGACGGG GGAGAAGAAG GTGGGGCACG CGGGCACCTT GGACCCGGAC
GCCTGCGGGG TGATGGTGCT TCTTATAGGA AAGGCCACCC GGGCAGCTCA GTTCCTGGTG
ACGGAAGACA AGGAGTACCG GGCCGAGGCA GTCTTTGGTG TCAGAACCGA TACTTTAGAC
CTCAGCGGTC GGGTGTTGGC CTGCCAGGAC GCCTCCTGGC TTACGCCCGA AGCAGTAGCT
GAAGTCTTGC CGCAATTCAC AGGGAGCATC TGGCAAAAGC CTCCTATGTT TTCGGCTGTT
CGCTACAAAG GCAAGCGCCT CCACGAGCTG GCAAGGGCGG GGCAGGAGGT GGAGGTGCCG
CCGCGCCGGG TGGAAGTTTA CTCTCTGCAA CTGCTCAAGG GGGATTGGGG GAAAAGGCAC
CCCCGGGTGT GGCTTCACGT GCACTGCGGC AAAGGGACTT ATGTGCGCTC TTTGGTGGCT
GATCTGGGTG AGGCTCTGGG AACGGGAGCC TGCCTGGGGT TTCTCCTGCG CACCCGGGTG
GGGCGCTTCG GAATAGGAGA GGCTTATACC CTGGAGGAAC TGGCCAGGCT GAAGGAAGAA
GGGAAACTTG CCAAAGCTCT GATTCCCCTG GCGGAGGCTC TAGGACACCT GCCGGCGATA
GAGGTGGGAG AAGAAGGGGC TAAGAGGATC AAGAACGGAG GATTTCTTTC TCCAGCTCAT
TGTCTTGCCG GAAAGTGGCC TTCGGAAGGG ACCCACGTGC GAGTCATGGG TGCAGGAGAA
CTTCTGGCCC TGGCTCTGGC CGAATCCCTT CCCTCCGGCC AGAAGGTTTT GCGACCGGTA
TGGGTATTAT GA
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| Protein sequence | MIGVLNVLKP PGMTSHDVVD WLRRLTGEKK VGHAGTLDPD ACGVMVLLIG KATRAAQFLV
TEDKEYRAEA VFGVRTDTLD LSGRVLACQD ASWLTPEAVA EVLPQFTGSI WQKPPMFSAV
RYKGKRLHEL ARAGQEVEVP PRRVEVYSLQ LLKGDWGKRH PRVWLHVHCG KGTYVRSLVA
DLGEALGTGA CLGFLLRTRV GRFGIGEAYT LEELARLKEE GKLAKALIPL AEALGHLPAI
EVGEEGAKRI KNGGFLSPAH CLAGKWPSEG THVRVMGAGE LLALALAESL PSGQKVLRPV
WVL
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