| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1567 |
|---|
| Symbol | |
|---|
| ID | 8491562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1558932 |
|---|
| End bp | 1559918 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359560 |
|---|
| Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
|---|
| Protein accession | YP_003239512 |
|---|
| Protein GI | 260893415 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGCCG AGGTGAGCCG AGCAGTCTTT CTTTCAGCCT GCTCGACGGT GATCCTGGGG
TTCTGGCTCG TCCCGGTGCT CAAGCAACTT AAAGTAGGGC AGAGGATTCG TACCGATGGC
CCGGCCCGGC ACCTAGTAAA GGCGGGTACG CCTACCATGG GTGGAATCAT GTTTCTCGGC
GGGATGACCG TGGCTGTTTT ATCCTTAGCC CGGCACCGGC CTGACGGGGT AGTGGTCCTC
CTGGTAGCTC TTGCCTATGG CCTCATAGGC TTTTTGGACG ACTTTCTGAA GGTTATAAAA
GGTCGTTCTT TGGGCCTGCG CGCCCGGGAG AAGCTTCTGG CACAGGTCTT GGTGGCGGCG
GGCTTAGCCT GGTGGGCCTG TGCTTTTGCC GGACGGGGTA CTGATTACGT GCTTCCCTTC
TCCGGCTTCT GGGAAGTGGG GGGAATCCGC TTCGATTTAG GCTTTCTCTT TTTCTTCTTC
TTTACCATCC TGGTGCTGGT GGGTTCGGCC AATGCCCTGA ACCTCACCGA CGGGCTGGAC
GGCTTGGCTG CTACCTTAAC GGCCATAGCG GCCGGCTTTT ACGTTTTCAT TGCCTTAGTG
GTGGACAAAG TGGGCGTGGC TGTTACTTTG GCGGCGATGG TGGGCGGGTG CCTGGGGTTT
TTGGTTTTCA ATCGCCACCC GGCGAAAATC TTTATGGGTG ACACCGGCTC TTTGGCGCTG
GGAGGAGCCC TGGGGGCAGC GGCAGTACTG ACGCGCACCG AGCTTTTCCT GCCCGTGATC
GGGGCGGTCT TCGTGGCCGA GACCCTGTCG GTGATCTTGC AGGTACTTTC CTTCCGCTTG
ACCGGTAGGC GGATTTGGCG CATGAGCCCG CTGCACCACC ACTACGAACT CAAAGGGTGG
TCGGAAAATA AGGTGGTCCT GGTCTTCGCC TTCTGGGGAA TAGTGGCCGG AGTCTTGGGA
CTTTCAGGGC TTTACCGCTT AGGTTAG
|
|---|
| Protein sequence | MTAEVSRAVF LSACSTVILG FWLVPVLKQL KVGQRIRTDG PARHLVKAGT PTMGGIMFLG
GMTVAVLSLA RHRPDGVVVL LVALAYGLIG FLDDFLKVIK GRSLGLRARE KLLAQVLVAA
GLAWWACAFA GRGTDYVLPF SGFWEVGGIR FDLGFLFFFF FTILVLVGSA NALNLTDGLD
GLAATLTAIA AGFYVFIALV VDKVGVAVTL AAMVGGCLGF LVFNRHPAKI FMGDTGSLAL
GGALGAAAVL TRTELFLPVI GAVFVAETLS VILQVLSFRL TGRRIWRMSP LHHHYELKGW
SENKVVLVFA FWGIVAGVLG LSGLYRLG
|
|---|
| |