| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1553 |
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| Symbol | |
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| ID | 8491548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1544601 |
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| End bp | 1545329 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646359546 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_003239498 |
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| Protein GI | 260893401 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000347236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGGCC AACTTCAAAC CTTGAAGCTG CGTTTTAAAC TCTGGCTTTA CCTCTGGCTT
CTGCGGCTTA AGCCAGCAGG GTTTTATGTG GGCGGACCGG AAGCCCTCCC GCCCCCGCTT
GACGCCGAGG AAGAGGCCCA CTTGCTCAAG CGGCTGGAGG CAGGGGACCA GTCGGTGCGG
AACACTTTAG TGGAGCGCAA CTTGCGCCTG GTGGTTTATA TAGCCCGGAA GTACGAGAGT
ACGGGTATCA ATCTGGAGGA CCTGGTCTCT ATCGGGAGTA TCGGCCTTAT TAAAGCGGTC
AACACCTTTA ATCCCCAACG CAAGGTCAAG CTGGCCACCT ATGCTTCGCG CTGCATCGAG
AACGAAATTT TGATGTTTTT AAGGCGGCAG TCTCGGACCC TGCGGCAAGA GGTGTCCTTC
GACGAGCCGC TTAATACCGA CTGGGATGGC AACGAACTTT TGCTTTCTGA CGTTTTGGGG
ACGGAGGGAG ACGTAACCTC GCGCCACCTG GAGGAAGAAG TGGATCGCAG GGTCCTTAAG
CTCGCCCTGG CCAGCCTAAG CGGGCGCGAG CGGGTCATAA TGGAGCTGCG CTTCGGCCTG
GGGGCCGACG GCGAGGAGAA GACCCAAAAA GAGGTAGCCG ACCTTCTAGG GATTTCCCAG
TCCTATATTT CCCGGCTAGA AAAACGCATT CTCAAGCGCT TGCGGCGGGA GATCTGCCGG
CTAGCTTAA
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| Protein sequence | MLGQLQTLKL RFKLWLYLWL LRLKPAGFYV GGPEALPPPL DAEEEAHLLK RLEAGDQSVR
NTLVERNLRL VVYIARKYES TGINLEDLVS IGSIGLIKAV NTFNPQRKVK LATYASRCIE
NEILMFLRRQ SRTLRQEVSF DEPLNTDWDG NELLLSDVLG TEGDVTSRHL EEEVDRRVLK
LALASLSGRE RVIMELRFGL GADGEEKTQK EVADLLGISQ SYISRLEKRI LKRLRREICR
LA
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