| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1478 |
|---|
| Symbol | |
|---|
| ID | 8491471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1481829 |
|---|
| End bp | 1484006 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359470 |
|---|
| Product | Amylo-alpha-16-glucosidase |
|---|
| Protein accession | YP_003239424 |
|---|
| Protein GI | 260893327 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCTGG AAGATAGTCT GCGCATAGCG CCAGCTTCCA CACCAGGTGT AACCGAGGTC
CTCAAAAACA ACGATCTTTT CTTGGTTTCT TTGCCCGATA GTTCCATACC CGCCGGGTAT
CCTGGAGGCT TAGGGCTTTA CTTCCGGGAT ACCCGTTTTC TTAGTCGCCA CGAACTTTTC
ATCAATGGAC GGGAACCTGT ACTTCTCTCT TCTGGAGTGC GCTTCAGCCA CTTCTGCCAG
TGCGATCTCA CCAACCCGGA GCTGCGAGAC GAAAAAGGAG CCGTCTTGGC TCCCATGGAG
TCGCTTCACC TGCGGCTCCT GCGCTTTCTC AATGGCTCCC TTTACCAGCG CTTACGGGTG
ACCAACTACG GCTACAATAA AGTGGCTTTG ACCCTAACTT TGAAACTAGG TGCCGACTTC
CGGGACATAT TCGAGCTACG CGGCGTACCT CGGCGGAGCC GGGGTACGCT CCTCCCCTTC
TGCACCGGCC GGGAAGGCTT GGTTTTTCGC TACCGGGGGC TTGATGAACT CACCCGGCGT
ACCACCGTCA TCTGGGATCC CCCTCCCGCC GACATATTCG CCGAAGGGGA CGACGTAGTT
CTGACTTATA GGTTCGAGCT TGAGCCTAAA GAGCGGGTGT ACTTTTACTG GCGGATAATG
CCGGAGATAG AGACCGTACC GGAAAGCCTT ATCATCGTAA AAGAAGGAGA TCTGCGCTCG
GCCTTTACCC GGCTGGCCGC CCAGCAAAAA AAAGCTTACT ATCAGTGGTA CGAGAGCTGT
ACGCGGCTAG AAAGTGACCG CCCGCGCATA AACCAGATGT TCAACCAAGC CCTTTCCGAC
CTCTGGATCC TGCAAACCCG CTACCCCGAA GGCACGGGCA TAGACGCCGG CATCCCCTGG
TACGCCACCC TCTTTGGCCG CGACGCCCTC ATCACTGCCT GGCAGACTCT CGCCATCAAC
CCCGACCTGG CACGGGAAAC CCTGCGCCTG CTCGCTCACT ACCAGGGCAA GACCGTGGAT
CCCGTCCGGG AGGAAGAGCC GGGCAAGATT ATCCACGAGA TAAGAAGGGG AGAAATGGCC
AACTGCCGGG AGATACTCCA CACCCCCTAC TACGGTTCCA TTGACTCTAC CTTGTGGTTC
ATCATTGTTC TGGGCGACTA CATAATCTGG ACCAAGGATC TAACCTTCCT GGAGGAGATG
CGCCCTGCAC TGGAGGCAGC TCTGGAGTGG TGCTACAAGT ACGGCGACAA GGACGGCGAT
GGCTACATCG AGTACGAGGG GAGCAAGTAC GGGGGGCTGC AGAACCAGGG CTGGAAGGAC
TCGTGGGACG GGGTACCCGA TCCGGAAGGG AAGCCGGTAA AACCGCCCAT CGCCCTGGTG
GAAGTCCAGG GGTACCTCTA CGCCGCTTAC CGGCGGGCTT CCCACCTCTT TAACCTGCTC
AAAGAGCGGG AAAAGGCCAA CTTTTACGCC CGCAAAGCTA CCGAGCTACG CCGGCGCTTT
CTCAAGGACT TCTGGGTCAA AAAAGGCAAC TACCTGGGGT TGGCGCTCGA CGGGGATAAG
CGCCTCATCC CCACCGTAGC CTCCAACATG GGGCAGGTGC TCTTCACCGG AATTCTACCG
CCGCAAAAGG CCAGGCAGGT AGCAGACCGC CTCTTCGCCC GCGATATGTT CTCCGGCTGG
GGTATCAGAA CCTTGAGCCG CCGGGAAAAA GCCTACAACC CTATAAGCTA CCACAACGGC
TCCGTCTGGC CGCACGATAA CAGCATTATC GCCGTGGGCC TCAGGCGCTA CGGCTTCCTC
AAAGAACTGG AGGAACTTGC CTCCTCTCTC TACGACGCCG CCTTGCGCTT CCCCTACTTC
CGCCTGCCCG AGCTCTTCTG CGGGTTCGAC CGGCGTCCTT TTGCCAGCCC CATCCGCTAC
CCAGTGGCCT GCGAGCCGCA GGCCTGGGCC ACAGGGAGTA TCTTCCTCCT GCTACAAGCC
TGCCTAGGGC TAAAGTGCAC TCCAGAAGGG CTCCTGATCC AGTCCCCCCT ACTTCCCGCT
GGAATCCAGG AACTGTACCT CTGCGGGCTG CGGGTGCAGG GGGCAAAGGT GGGGCTGGAG
TTCGTCCGCC GCAACGGACA CATTCTCTGC TTTCCCACCA GACGGGAAGG AGACCTCAAG
ATCACCATCG AAACCTGA
|
|---|
| Protein sequence | MQLEDSLRIA PASTPGVTEV LKNNDLFLVS LPDSSIPAGY PGGLGLYFRD TRFLSRHELF
INGREPVLLS SGVRFSHFCQ CDLTNPELRD EKGAVLAPME SLHLRLLRFL NGSLYQRLRV
TNYGYNKVAL TLTLKLGADF RDIFELRGVP RRSRGTLLPF CTGREGLVFR YRGLDELTRR
TTVIWDPPPA DIFAEGDDVV LTYRFELEPK ERVYFYWRIM PEIETVPESL IIVKEGDLRS
AFTRLAAQQK KAYYQWYESC TRLESDRPRI NQMFNQALSD LWILQTRYPE GTGIDAGIPW
YATLFGRDAL ITAWQTLAIN PDLARETLRL LAHYQGKTVD PVREEEPGKI IHEIRRGEMA
NCREILHTPY YGSIDSTLWF IIVLGDYIIW TKDLTFLEEM RPALEAALEW CYKYGDKDGD
GYIEYEGSKY GGLQNQGWKD SWDGVPDPEG KPVKPPIALV EVQGYLYAAY RRASHLFNLL
KEREKANFYA RKATELRRRF LKDFWVKKGN YLGLALDGDK RLIPTVASNM GQVLFTGILP
PQKARQVADR LFARDMFSGW GIRTLSRREK AYNPISYHNG SVWPHDNSII AVGLRRYGFL
KELEELASSL YDAALRFPYF RLPELFCGFD RRPFASPIRY PVACEPQAWA TGSIFLLLQA
CLGLKCTPEG LLIQSPLLPA GIQELYLCGL RVQGAKVGLE FVRRNGHILC FPTRREGDLK
ITIET
|
|---|
| |