| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1402 |
|---|
| Symbol | |
|---|
| ID | 8491394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1405181 |
|---|
| End bp | 1405612 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646359399 |
|---|
| Product | protein of unknown function DUF134 |
|---|
| Protein accession | YP_003239354 |
|---|
| Protein GI | 260893257 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1342] Predicted DNA-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGAC CGCCCAAGTT CCGCCGCGTG GCCTTTCTCC CCCCCTTTGT CGTCTACAAA
CCCCAAGGGG TTCCCCTGGA AGAGATGGGA GTAGTGAATT TGGCGGTGGA AGAGCTGGAA
GCCCTTCGGC TCAAGGACTT GGAGGGGCTG GAGCAGGAAG AGTGTGCCAA CAGAATGGGG
ATTTCCCGTC CCACCTTCCA GCGCCTACTG GTAGGGGCGC GTGCCAAGGT AGCCGAAGCC
CTGGTCAAGG GAAAGGCTCT GCGCATCGAA GGGGGGAATT TTCTCCTGGT AACCCACCGG
CAGTGCGCCC GCTGCCACGA GGAATGGGAG GCCTTGGAAG GGGAGGTATG TCCCCGCTGT
GGCGCTCCCA GGGGAAGGGG GCGCTGCAGG CGACGTAGGG GCGTCTGGAC GCTTCCCGAT
ACCGAAGAGT AA
|
|---|
| Protein sequence | MPRPPKFRRV AFLPPFVVYK PQGVPLEEMG VVNLAVEELE ALRLKDLEGL EQEECANRMG
ISRPTFQRLL VGARAKVAEA LVKGKALRIE GGNFLLVTHR QCARCHEEWE ALEGEVCPRC
GAPRGRGRCR RRRGVWTLPD TEE
|
|---|
| |