Gene Adeg_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0904 
Symbol 
ID8490890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp918348 
End bp919256 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID646358930 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003238891 
Protein GI260892794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGAAG TAGCCAGAAT CACTAACATT CACAGTAAGG TACAAGAGGG GGCCGAGGAC 
GAAAGTTGGG TAGTGGTAGA AGCTACGGCC CCGGTGGTTT GGGAGCTTTT CCGCCCTGAA
CCCCTGGTTT ACTGTCTGAA AGTTAAAGGA CGGGCCAACA TGTACACTGG TCCTCTGTCG
GTGCGGGACG GGATAGTACG GGAAGTGACC ATAGGCGTAG AGGGAGAATG GCTAATGTTT
CTCGTCCGTC TGGAGGCCCC GGCAGAGGTC AAGGCGGAGC TCCGGGTAGA GAAGCTTCCC
GTACGTCTCC TTTTACGCTT CAGCCGCTCT TGCTGGCGGA ACTTTTTCCG GGGCAAGTGC
ATAGTGGTCG ATCCAGGACA TGGAGGAACG GATGGCGGGC ATCGCGGTCC AGTAGATCTA
TGGGAAAAGG ACGTGGTCTG GGTCACGGCT CAGGAGTTCA AGCGCCAGCT GGAAAGGCTG
GGGGCAAAGG TTCGCCTCAC CAGGTCGCGG GAGGAAAACC CCTCCTGGGC AGAGCGGGCA
AGACTGGGCG AAGGAGCCGA CCTCTTCTTG AGCCTGCACA CCCACGGCGA GGCCGACCGC
CGGGTGCGCG GAGCGGCAGT GCTTTATAAC CCTACTTTTC CTCAAGGGGA GCTCTTGGCC
CAGGCCATGC TGGAGGAGAT AACAGCCAAG ACCAAGGTGC CGGGAAGAGG AGTTTTTTCT
TCTCTGGAGC TTGCGTTGCT CAACGGGCGT CCGGCTTTCA CCATAGAAAC GGTAACCATC
ACCAATTGGG TAGATGAGGG CATATTGCGT AACCCCTATT TCCACCGCAA GCTGGTGCTG
GCCACCCTTT CCAGCTTCTT TCGCTTTAGT CGGGGAATAA GTGAGGTAGC CGACCATGTT
TGTGGCTAA
 
Protein sequence
MEEVARITNI HSKVQEGAED ESWVVVEATA PVVWELFRPE PLVYCLKVKG RANMYTGPLS 
VRDGIVREVT IGVEGEWLMF LVRLEAPAEV KAELRVEKLP VRLLLRFSRS CWRNFFRGKC
IVVDPGHGGT DGGHRGPVDL WEKDVVWVTA QEFKRQLERL GAKVRLTRSR EENPSWAERA
RLGEGADLFL SLHTHGEADR RVRGAAVLYN PTFPQGELLA QAMLEEITAK TKVPGRGVFS
SLELALLNGR PAFTIETVTI TNWVDEGILR NPYFHRKLVL ATLSSFFRFS RGISEVADHV
CG