| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0656 |
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| Symbol | |
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| ID | 8490641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 680997 |
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| End bp | 681890 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646358691 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003238653 |
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| Protein GI | 260892556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.323596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAG ACGGCAACAC CAGAATAGTA GGTATCTTTG GCGATCCTAT TGCTCACACC
CTCTCCCCCC ATATGCACAA CGCCGCCTTT CGGGCGCTTA ACCTCAACTA CATTTATGTC
CCTTTCTGGG TGCGGCGGGA GGAGCTAGCG GAAGCCACGG CAGCTATAAG GGCCCTTAAT
CTGGCCGGGG TAAACGTCAC CGTTCCCCAC AAGGAAGCCA TAATACCTTA CTTGGATGAG
TTGGAGGAAG AGGCGTGTCT CATCGGAGCG GTAAATACGG TGGTCAACCA AGGTGGCAAA
CTCTGGGGCA GCAACACCGA TGCTTCCGGT TTCCTGGCTG CTTTGCAGGA AGAGGGCTTT
GCGCCGGCGA AGAAAAAAGT AGCGGTGCTG GGAGCAGGAG GAGCGGCCAG AGCGGTAGGG
GTGGCTCTGG CTAGGTCGCA GGTGGAGGAG ATAACCTTTT TTAACCGCAC CTTTGATCGA
GCGGCAGAAC TGGCGGCTTA TCTGGAGGAA AGGACAGGAG TAAGGGCGCG TGCCCTTCCT
TGGGAGGAAA TGGGAAGCTT CAGGGGAATA GAATTTCTGC AGGCAGCAGA TCTTATAGTC
CAGACCACCA GCCTGGGCAT GCATCCCCGC GAGGGCGAAA TGCCTCCGGT AGCGGAAGAG
GCTTTCCGGC CAGGCCAACT GGTGATCGAC CTGGTCTATC GTCCCTTAAA AACCCGTTTC
TTATCTTTAG CCCAGAAGAG GGGAGCTAAG ACTGCCAGCG GCCTTGGTAT GCTTCTCTAT
CAGGGAGCGC TGGCTTTTTC CTTGTGGACT GGTGTGCCCG CTCCTCTGGA GGTCATGCGG
GCGGCGCTAG AAGAGGCCCT GGGAGTGGGA CAAGGGAGGG GAGAGAATGC TTAG
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| Protein sequence | MQIDGNTRIV GIFGDPIAHT LSPHMHNAAF RALNLNYIYV PFWVRREELA EATAAIRALN
LAGVNVTVPH KEAIIPYLDE LEEEACLIGA VNTVVNQGGK LWGSNTDASG FLAALQEEGF
APAKKKVAVL GAGGAARAVG VALARSQVEE ITFFNRTFDR AAELAAYLEE RTGVRARALP
WEEMGSFRGI EFLQAADLIV QTTSLGMHPR EGEMPPVAEE AFRPGQLVID LVYRPLKTRF
LSLAQKRGAK TASGLGMLLY QGALAFSLWT GVPAPLEVMR AALEEALGVG QGRGENA
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