| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0385 |
|---|
| Symbol | |
|---|
| ID | 8490351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 393451 |
|---|
| End bp | 394581 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646358408 |
|---|
| Product | glutamate synthase (NADPH) |
|---|
| Protein accession | YP_003238389 |
|---|
| Protein GI | 260892292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0067] Glutamate synthase domain 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCGGC TTTTTTGCGT GACTAGCGAC GAACCTCAGT CTCCCATGCT GGCCCTCAGG
GCGTTAGATG TCATGCGGGA AGGGCATGAC GGTTCTGGTG TGGGGCTTTT TCTTACCGAT
CTCACCGGTC CCTTCGCAGA ACTCAAGGAC AAGCCTATCC TCTCGGGAAT TTTTACTAAA
GACGGACTCC GACGCCTCAA CGACTTCATG AACGCGCTGG GTTTTTGGCC CTTATACCGG
CTGGTAATAA CCACCGACAA GGAGCCTCCC CCAGGAACTC CTAAGAGAGA TTTTTATCTT
ATCCAAGTTT ACGAGTACCC AGATGGCTGG GAAAATTTGG ACCAAGAAGA AAAAGAGTTT
CGCCTCATGA TGACGCGCCT GCAACTCCGC TGGATGGGTG AAGAGAAAGA GGATATCATT
GTTTTCAGCT TTTGGCCGGA CGTGATCATG ATCAAGGAAG TGGGTGACCC CTTGCTGGTA
GGTGAGTACT TGCGACTCGA CCGAAAAGAG TTGCAGGCAC GGGTAATAAT GGCCCAGGGA
AGGCAGAACA CGAACTACGC CATTAACCTT TATGCCTGTC ACCCCTTTTT TATCCAGGGG
ATAGCCACCA TGACTAACGG GGAGAACACA GCCTTTGTTC CCATAAGGGA GTTTCTCCTT
TCCCGGGGCT TTCCGGGCTA TACCGGCTAT CAGTCCGACT CCGAAGTCTT TACTCACATT
CTCCACTACG CTCTCAAAAA GCTGGGACTA AAGCTGGAGT ACTACAAGCA CCTCATCACA
CCGCTAACCG ACGAAGAGAT AAAGCGGCAC CCTAACCGGG AGCTCTTGCG TCGGCTCAAG
CTGGCCTGTC GCCCGCTCAC CATAGACGGG CCCAACTGCG TGATCGGTTG CCTGCCCGAT
AAGACGGTTT TTATGGTGCA GGACCGCAAG AAGCTCCGCC CCGGCGTGGT AGGAGGAAGA
CCGGGGTTTT ACGTTCTGTG CTCCGAGATG TGCGGGCTGG ACTTCGCCGT ACCCGACCGG
GATAAGAGCC AGGATTTCCA ACCCATGCAC CTCGACACCG TCATCGTCTA TCCCGACCGA
CGGGAGGTGA GACGATGCTC CCAGATGGAA CCCTTACCCC CTCTTCACTA G
|
|---|
| Protein sequence | MCRLFCVTSD EPQSPMLALR ALDVMREGHD GSGVGLFLTD LTGPFAELKD KPILSGIFTK
DGLRRLNDFM NALGFWPLYR LVITTDKEPP PGTPKRDFYL IQVYEYPDGW ENLDQEEKEF
RLMMTRLQLR WMGEEKEDII VFSFWPDVIM IKEVGDPLLV GEYLRLDRKE LQARVIMAQG
RQNTNYAINL YACHPFFIQG IATMTNGENT AFVPIREFLL SRGFPGYTGY QSDSEVFTHI
LHYALKKLGL KLEYYKHLIT PLTDEEIKRH PNRELLRRLK LACRPLTIDG PNCVIGCLPD
KTVFMVQDRK KLRPGVVGGR PGFYVLCSEM CGLDFAVPDR DKSQDFQPMH LDTVIVYPDR
REVRRCSQME PLPPLH
|
|---|
| |