| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0278 |
|---|
| Symbol | |
|---|
| ID | 8490243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 273399 |
|---|
| End bp | 274403 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646358310 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003238292 |
|---|
| Protein GI | 260892195 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.364579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCT TCCACTGGGT CTTCTTCCTG GGCTTTGTGC TCCTGGTCTT CGGGGTGCTG
GTGGCGAGCC TGGGCTGGGG TTCGGTTAAG GTGCCACCGG AGAAGGTGCT GGCGGTGCTG
CTGCATCCCG GGCGCCCGGG GCTGGCGGAG GCGGTGGTGG TCAAAATCCG CCTTCCCCGG
GCGCTGGGGG CACTGCTGGG CGGGGCGGCT TTGGGGGTGA GCGGTCTTTT GCTGCAGGTC
TTCTTCCGCA ACCCCATAGT GAGCCCCTAT GTCTTGGGCA TTTCCTCAGG GGCTTCGCTG
GCGGTGGGCA TCCTGGCTTT GAGCACCCTC ACCGCCGGCC TTTCCCTCAC CCCGACCCTT
CTGGCGCTGG CGGCTTTTGC CGGAGCCTTT GCGGTTACGG CGGCGGTGGC GGTGCTGGCT
CCCCGCACCC GCTCGGTGGT GACCTTACTG GTGATCGGCC TCATGTTCGG CTACCTGGCC
TCGGCCTGTA CCAGCATCCT CCTGGCCTTC GCCGAGAAGG AGCGGGTGCA CGGCTTCTAC
CTCTGGACCT TCGGCAGCTT CGCTCCCATG GACTGGGGCA AGGTGACGGT ACTGGCGGCA
GCCGGCTTTC CCCTTCTGCT TTTTTCCTTT CTTCTGGGCA AGGCGCTCAA CGCTTACCAG
GGGGGAGAGG AGTACGCCTT GAGCGTGGGG CTTAACGTGC GGCGCTTTCG GGTGGCGGTG
GTGGTGCTTT CCAGTGCTCT GGCCGGGCTG GTGACCGCCT TTGCCGGCCC GGTGGCCTTT
ATCGGCCTGG CCGTGCCCCA CCTGGCCCGG CTCCTTTTGC GCACGGCCGA CAACCGGGTG
CTCATACCGG CGGTGATCCT GCTGGGGGCG GCAGTCACCG GCCTTTGCGA TCTCCTGGCC
CGCCAGCTCT TCTGCCCGGT GGAGCTCCCC ATTACCGCCG TCACCTCCCT CTTCGGAGCT
CCCCTGGTCA TAGGCTTTCT TCTTAGAGGG AAGGTGAAGA TGTAG
|
|---|
| Protein sequence | MRRFHWVFFL GFVLLVFGVL VASLGWGSVK VPPEKVLAVL LHPGRPGLAE AVVVKIRLPR
ALGALLGGAA LGVSGLLLQV FFRNPIVSPY VLGISSGASL AVGILALSTL TAGLSLTPTL
LALAAFAGAF AVTAAVAVLA PRTRSVVTLL VIGLMFGYLA SACTSILLAF AEKERVHGFY
LWTFGSFAPM DWGKVTVLAA AGFPLLLFSF LLGKALNAYQ GGEEYALSVG LNVRRFRVAV
VVLSSALAGL VTAFAGPVAF IGLAVPHLAR LLLRTADNRV LIPAVILLGA AVTGLCDLLA
RQLFCPVELP ITAVTSLFGA PLVIGFLLRG KVKM
|
|---|
| |