Gene Adeg_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0189 
Symbol 
ID8490150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp185143 
End bp185559 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID646358225 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003238211 
Protein GI260892114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00357396 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATAG TGATCGATCC AGGGCACGGA GGAAGCGATC CGGGAGCAGT TTGCGGGAAT 
CTGCGGGAGG CGGATCTTAC CCTTAGGTTG ACCAGGCTTA TAGCGGAAAG GGTGGCTCCG
CCGGCGACTG TCATCCTGAC GCGCGGGGAA AACCGGGACG TTTCGCTTAA TGAGAGAGTG
CGGATAGCCA ACCGCCACAA CGCTGATCTT TTCCTTTCCC TGCACTTCAA CGCAGGCGGA
GGGAGGGGCT TTGAAAGTTA CGTCCATCCC TCAGCTTTTC CCCTCACCCG CTACTACCGG
CAGATCCTGC ACGCGGCGGC CACCGGTTTT CTCCTCCCGC AAGGGACTCG AGACAGGGGA
GGGAAGGAAG CTGACTTTTA CGGCTCCGCT ACACCCGCAT GCCCGCCGTA CTTTTAG
 
Protein sequence
MRIVIDPGHG GSDPGAVCGN LREADLTLRL TRLIAERVAP PATVILTRGE NRDVSLNERV 
RIANRHNADL FLSLHFNAGG GRGFESYVHP SAFPLTRYYR QILHAAATGF LLPQGTRDRG
GKEADFYGSA TPACPPYF