| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2963 |
|---|
| Symbol | |
|---|
| ID | 5160661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 3243529 |
|---|
| End bp | 3244170 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640554893 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_001236072 |
|---|
| Protein GI | 148261945 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG ATCGTTACCG GCGGATTTTT CGCCACAAGA CAACCCTGCC GTTGCTGTTC
ATGGCCGCGC TAAGCCTGGG ACTGGCCAGC TGCGCGGCGC CGCCGGCGCC GAAAGTGCCG
ACCGTCGCGG TTCCGAACCC GACCTACCGG ATCGGGCCGG GGGATGTGTT GAGCGTGTTC
GTCTATGGCT CGCCCGATCT CTCGGAGGCG GCGGTGCCGG TGCGGCCGGA CGGACGGTTC
TCGATCCCGC TCGTCCAGAA CATCCGCGCG GCCGGCAAGA CGCCCCTGCA ACTGCAGAAC
GACATCGCCA GGCGGCTGAA AAGCTACGTC AAGAATCCCA ACGTCACCGT GATCGTCAAA
AGCTTTCACG GCGCGCTCGG CAGCGACATC AGGGTCATCG GCGCCGGCAA GCCGCGCGCG
ATCCCGTACG TCAACGGCAT GACCATGCTT GACCTGATGA CCGAGATCGG CGGCGTGCCC
CGTTTCGGCC TGGCCAACGG CGCCTTCATC ATCCGCCGCA CCGGCGGGCA TGACGTGAAG
ATCCCGGTCG CCCTCGGCGC GCTGCTGAAC CAGGGCGACC TGAAGCAGAA TATCACCCTG
CAGCCGGGTG ACATCGTCGT CATCCCGCGC AGCCTGTTCT GA
|
|---|
| Protein sequence | MNSDRYRRIF RHKTTLPLLF MAALSLGLAS CAAPPAPKVP TVAVPNPTYR IGPGDVLSVF
VYGSPDLSEA AVPVRPDGRF SIPLVQNIRA AGKTPLQLQN DIARRLKSYV KNPNVTVIVK
SFHGALGSDI RVIGAGKPRA IPYVNGMTML DLMTEIGGVP RFGLANGAFI IRRTGGHDVK
IPVALGALLN QGDLKQNITL QPGDIVVIPR SLF
|
|---|
| |