| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2594 |
|---|
| Symbol | |
|---|
| ID | 5162124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2848558 |
|---|
| End bp | 2850039 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640554519 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001235704 |
|---|
| Protein GI | 148261577 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.98451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC CCGCAATCGC GGCGCGTGGC ATCAGCAAGT CGTTCGGCGG CGTCAAGGCC
CTTACCAGGG CCTCGATCGC CGTCGCACGC GGCAGAGTTC ATGCGCTGGT GGGCGAGAAC
GGCGCCGGCA AGTCGACCCT GATCAAGATT CTCGGCGGCC GCATCCCGCC GGATGAAGGC
ACGGTGGAAA TGGCCGATGG CGGGCTGCGC GTCGGCACCG TGTTCCAGGA GCTGACGCTG
CTGCCCTTCA TGACCGTGGC GGAAAACCTG CTGCTCGGCC GCGAACCGCG CACCGGGCTC
GGCCTGATCG ACCGGGCCGC GATGCCGGCG ATCGCCGAGG CGGAACTCGC CGGCCTCGGG
ATCACCCATA TCGACACCCG CGCCCTTGCC GCCGATATCT CGCTCGCCGA GCGACAGATC
ATCGAGATTG CCCGGGTTAT CATGTCCGAG CCGCAGGTGC TGCTGCTCGA CGAGCCGACC
TCGGCGCTGG TCGAGCGCGA GGTGGCCTGG CTGTTCGGGC AGATCCGCGC GCTGCGCGAG
AAGGGGGCGG CGATCGTCTT CACCTCGCAC CGCTGGGGCG AGATCACGAG CATCGCCGAC
GAAATCACCA TTTTCCGCAA CGGCACCGAT GTCGGCACCT TCACCTCGAT CGCCGAGGAC
GAGGCGATCA CGCTGATGAC CGGCCAGAAG CTCGATGCGG TCTTTCCGCC GCGCGACGCC
CCGCCGGCGG CGCCGGCGCG CCTCACGCTG CGCGGCGCGC GGGCCGAGGG GACCGGGCTG
CTCGATCTCG ACCTGCATCC GGGTGAGATC CTCGGCATCG GCGGCCTCGC CGGGCACGGC
CATCGCGCCC TGTTCTTCGG CCTGTTCGGC GCGCCAGGCT TCCGCGAGGG GCGGGTCGAG
ATCGACGGCA AGCCGGTGCG CATCGCCTCG TCGCGCGACG CCATGCGCGC CGGCATCGCG
CTCGTGCCGG AGGACCGCAA GAGCGAGGGG CTGTTCCTGT CGCTCTCCGT GCGCGACAAT
TTCACTCTGC CGATCCTGCG TCGGCTCTCC CGTTTCGGCA TTCTGCGGCT GGGGGCGGAG
CGCGCGCTGG TGGCTGAAAA CATCCGGCGG CTCGCCGTGC GGACGCCCTC GGCGGCGCAG
CGCGTCGGCG CGCTGTCGGG CGGCAACCAG CAGAAGGTGC TGCTCGGCCG CTGGCTGATG
ACGCAGTCGC GCATCCTGCT GCTCTACGAC GTCACCCGCG GCGTCGATGT CGCGACCAAG
CACGAGATCT ATGAACTCGT CGCCGGGCTC GCGCGCGAGG GCTATGCGAT CCTGTTCTAT
TCGTCGGATG CCGAGGAACT CGCCCATCTC TGCCATCGGG TGAAGGTGAT GCGGCGCGGC
GCCTTCGTCG CCGAGATTGC GGCGGCGGAC CTGTCCGCGG AGGCGATCGT CGCCGCCGCC
ATGCGTGAAT CCGGTCAGAA AGAGGTGCCC AATGCCGCCT GA
|
|---|
| Protein sequence | MTAPAIAARG ISKSFGGVKA LTRASIAVAR GRVHALVGEN GAGKSTLIKI LGGRIPPDEG
TVEMADGGLR VGTVFQELTL LPFMTVAENL LLGREPRTGL GLIDRAAMPA IAEAELAGLG
ITHIDTRALA ADISLAERQI IEIARVIMSE PQVLLLDEPT SALVEREVAW LFGQIRALRE
KGAAIVFTSH RWGEITSIAD EITIFRNGTD VGTFTSIAED EAITLMTGQK LDAVFPPRDA
PPAAPARLTL RGARAEGTGL LDLDLHPGEI LGIGGLAGHG HRALFFGLFG APGFREGRVE
IDGKPVRIAS SRDAMRAGIA LVPEDRKSEG LFLSLSVRDN FTLPILRRLS RFGILRLGAE
RALVAENIRR LAVRTPSAAQ RVGALSGGNQ QKVLLGRWLM TQSRILLLYD VTRGVDVATK
HEIYELVAGL AREGYAILFY SSDAEELAHL CHRVKVMRRG AFVAEIAAAD LSAEAIVAAA
MRESGQKEVP NAA
|
|---|
| |