Gene Acry_2396 details

Gene Information

• Locus tag: Acry_2396
• Symbol: dnaE
• ID: 5160495
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 2639419
• End bp: 2642838
• Gene Length: 3420 bp
• Protein Length: 1139 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640554322
• Product: DNA polymerase III subunit alpha
• Protein accession: YP_001235509
• Protein GI: 148261382
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCACG CCGATTTCGT CCATCTCCGC GTCCACTCCG CCTATTCCCT CTCCGAAGGC 
GCCATCAAGC CGGACAAGAT CGCCACCCTC GCGCGCGACA ACGCGATGCC CGCCGTCGCC 
ATCACCGACA CCTCGAACCT GTTCGGCTCG ATCGAGTTCT CCCAGGCCTG CATGGGCAAG 
GGCGTGCAGC CCATCGTCGG CTGCCAGATC GGCCTTGCCC GAACCGACCT GCCGCGGCTG 
CCGCCCGACC CGCTGGTGCT GCTCGCGAAG GACGCCACCG GCTTCGCCAA TCTCTCGAAA 
CTCTCCTCCC GCAGCTTTCT CGACACCGAA CCCGGCCTCC GCCCGCAAAT CAGCCTCGAT 
ACGCTGCGCG ACCATCACGA GGGCCTGTTC CTCCTCACCG GCGGCCGCTT CGGCCCGGTC 
GGCCGCCTGC TCGGCGACGG CCAGCGCCCC GAGGCCGCGC GCCTGCTCGC CGCCCTCGCC 
GAAACCTTCC CCGACCGTCT CGCTGTCGAG CTGGAACGTC ACGACCTGCC AACTGAGCGC 
GCGGTCGAGC CAGGGCTGAT CACGCTGGCG GACGAAGCCG GCCTGCCGCT CGTCGCCACC 
AACGAATGCT TCTTCGCCAC CGAGACGATG CACGAGGCGC ATGACGCGCT GCTCTGCATC 
GCCGAAGGCC GGGTTCTCTC CGAGGCCGAG CGCCGCCGCG TAACACCGCA TCACTGGTTC 
AAGCCGGCGG CGGAGATGCG CCGCCGCTTC GCCGACCTGC CCGATGCCTG CGACAACACG 
CTGGCCATCG CCCGGCGCTG CGCGATCGCC GCCCCCACCC GCAAGCCGCT GCTGCCGATC 
TGCCCCAAGG TGCGCGACGG CGCGACCGAG GCGGAAACCC TCCGCGCCAT GGCCGAGGAA 
GGCCTCGCGC TCCGCCTCGC CGCGATGAAC GCCGATGCGG CGACGGCGGC GAAATACCGC 
GAGCGCCTCG CCCTCGAACT CGGCATCATC GAGCAGATGG GCTTCCCCGG CTACTTCCTG 
ATCGTGGCCG ACTTCATCCA GTGGGCGAAA TCCCAGGGCA TCCCGGTTGG CCCCGGCCGC 
GGCTCCGGCG CCGGCTCGCT CGCCGCCTGG GCGCTGCTGA TCACCGATAT CGACCCGATC 
CCCTTCAACC TGCTGTTCGA GCGCTTCCTC AACCCCGAGC GCGTCTCGAT GCCGGATTTC 
GACATCGATT TCTGCCAGGA GCGGCGCGAC GAGGTGATCG CCTATGTCCG CCGCGAATAC 
GGTGCAGACC GCGTCGCCCA GATCATCACC TTCGGCAAGC TCCAGGCCCG CGCCGCGGTG 
CGCGACGTCG GCCGCGTGCT CGGCCTGCCC TATGGCCAGG TCAACAAGGT CGCCGAGATC 
GTGCCCAACA ACCCGGCCAA GCCGATCCCG CTGGCCGAGG CCGTGGATGC CGAGCCCCGC 
CTGCGCGAGA TGCGGGACTC CGATGAATCG GTGAAGCGCC TGATCGAGAT CGCGATGCAG 
GTCGAGGGCC TCTACCGCCA CGCCTCCACC CATGCCGCCG GCGTCGTCAT CGGCGACCGC 
CCGCTGGACG AGCTTGTCCC GCTCTACAAG GACCCGCGCT CGGACATGCT CATCACCCAG 
TATTCGATGA AGCATGTCGA ACAGGCCGGC CTCGTGAAGT TCGACTTCCT CGGCCTGACC 
ACGCTGACCA TCATCAGCCG CGCGCTGAAC TTCCTCGACG GCCTCGGTAC CCCGGTCGAC 
ATCGCGAAGA TCCCGCTCGA CGATGCGAAA ACCTACGAAA TGCTCTCCCG CGCCGAGGCC 
GGCGGGGTGT TCCAGTTCGA AACCCAGGGC TTCCGCGACG TGCTGCGCCA GATGCGCCCC 
GACCGGTTCG AGGACCTGAT CGCCGCCGTC GCCCTCAACC GCCCGGGCCC GATGGCCAAC 
ATCCCCGCCT ATTGCGCCCG CAAGCACGGC GAATCCTGGG AAAGCCCCGA CCCGTCGATC 
CACGAGATCC TCTCCGAGAC CTACGGCATC ATGGTCTACC AGGAGCAGGT CATGCAGATC 
GCCCAGAAAA TGGCGGGCTA CAGCCTCGGC GCCGCCGACC TGCTGCGCCG CGCCATGGGC 
AAGAAGATCC GCGCCGAGAT GGAGGCGCAG CGGAAAATCT TCGTCGAGGG CGCGGTCGCG 
CGCGGCACCG CCGAGGCCAA GGCCGTCGAG GTGTTCGACC TGATGGCGAA ATTCGCCGAT 
TACGGCTTCA ACAAATCCCA CGCCGCCGCC TACGCGCTGG TCTCCTACCA GACCGCCTGG 
CTGCGCGCGA ACCACCCCGC CGCCTTCATC GCCGCGTCGA TGAGCCTCTC GCAAGCCAAC 
CACGAGAAAC TCGCCGCCCT CAAACAGGAC GCGGTGCGGA TCGGCATTCC CGTCCTGCCG 
CCTGACATCA ACGCCTCTGC GGCCGATTTC ACCGTCGAAC GCCAGGCGGA CGGCACGCTC 
GCCATCCGCT ACGCCCTCGC CGCGATCAAG CGCGTCGGCG CCGGCGCGAT GCAGGACGTG 
GTGCGCGCCC GCGCCAACCG CCCCTTCGCC GACCTCGCCG ATTTCGCCGC CCGCGTCGAT 
CCCCGTGCGC TCAACAAGGC GCAGATCGAG CAGCTCGCCC GCGCCGGCGC CTTCGACCGG 
ATCGACCCCA ACCGCGCCCG CGTCGCCGCC GGCGCCGAGC TGCTGGTCCG CCGCGCCCAG 
GCCGAGGCCG AGTCCCGCGC CTCCGGCCAG ATCAACCTGT TCGGCGACGC CGCCGCCCCC 
GAACCCCTGC CCCTGCCCGA CGTGCCGGAC TGGCCGGCCT TCGAGCGGCT GAGCTTCGAG 
GCCGAGGCGG TGGGCTATCA CCTTACCGCC CACCCGCTCG ATGCCTACGA CACCGTGCTG 
CGCCGCCTCG GCGTCGTTCC CTCGAACCTG ATCGAGGCAC GGGCGAAGGC CGGCATCGGC 
CGGGTCAAGC TCGCCGGCGC CGTGGTCGGC CGCAAGGAGC GCACCACCCG CACCGGCAGC 
CGCATGGCCT GGGTCATGCT GTCCGACCAG GCCGGCGGCT TCGAGGTCAC GCTGTTCTCC 
GAACTCCTTG CCACCGCGCG CGAGCTGCTC GCCGAGGGCG CGATGCTGCT CGTCACCGCC 
GATCTGCGGC TCGATGGCGA AAGCCTGCGC GTCACCGCGG TCGATGTCGA ACCGCTCGAC 
AAGGCGGCGG CCAATGCCGG CGCGGGGCTG CGCATCACCG TCGAGGGGCG CGAGGCGCTC 
GGCTCGATCC GCGCGCTGCT GGAGCGCGAG GGCCGCGGCA AGGGCCGCGT GCTGCTCGCC 
CCGCGGATCG ACACCGGTGC CCGGCTCGAC ATCGCGCTGC CCGGCGGCTT CAACGTCTCG 
CCCCGCCTCG CCCAGGCGAT GAAAATGATC CGCGGCGTCG CCGAGGTGGC GGAGCTCTGA 

 

Protein sequence

MPHADFVHLR VHSAYSLSEG AIKPDKIATL ARDNAMPAVA ITDTSNLFGS IEFSQACMGK 
GVQPIVGCQI GLARTDLPRL PPDPLVLLAK DATGFANLSK LSSRSFLDTE PGLRPQISLD 
TLRDHHEGLF LLTGGRFGPV GRLLGDGQRP EAARLLAALA ETFPDRLAVE LERHDLPTER 
AVEPGLITLA DEAGLPLVAT NECFFATETM HEAHDALLCI AEGRVLSEAE RRRVTPHHWF 
KPAAEMRRRF ADLPDACDNT LAIARRCAIA APTRKPLLPI CPKVRDGATE AETLRAMAEE 
GLALRLAAMN ADAATAAKYR ERLALELGII EQMGFPGYFL IVADFIQWAK SQGIPVGPGR 
GSGAGSLAAW ALLITDIDPI PFNLLFERFL NPERVSMPDF DIDFCQERRD EVIAYVRREY 
GADRVAQIIT FGKLQARAAV RDVGRVLGLP YGQVNKVAEI VPNNPAKPIP LAEAVDAEPR 
LREMRDSDES VKRLIEIAMQ VEGLYRHAST HAAGVVIGDR PLDELVPLYK DPRSDMLITQ 
YSMKHVEQAG LVKFDFLGLT TLTIISRALN FLDGLGTPVD IAKIPLDDAK TYEMLSRAEA 
GGVFQFETQG FRDVLRQMRP DRFEDLIAAV ALNRPGPMAN IPAYCARKHG ESWESPDPSI 
HEILSETYGI MVYQEQVMQI AQKMAGYSLG AADLLRRAMG KKIRAEMEAQ RKIFVEGAVA 
RGTAEAKAVE VFDLMAKFAD YGFNKSHAAA YALVSYQTAW LRANHPAAFI AASMSLSQAN 
HEKLAALKQD AVRIGIPVLP PDINASAADF TVERQADGTL AIRYALAAIK RVGAGAMQDV 
VRARANRPFA DLADFAARVD PRALNKAQIE QLARAGAFDR IDPNRARVAA GAELLVRRAQ 
AEAESRASGQ INLFGDAAAP EPLPLPDVPD WPAFERLSFE AEAVGYHLTA HPLDAYDTVL 
RRLGVVPSNL IEARAKAGIG RVKLAGAVVG RKERTTRTGS RMAWVMLSDQ AGGFEVTLFS 
ELLATARELL AEGAMLLVTA DLRLDGESLR VTAVDVEPLD KAAANAGAGL RITVEGREAL 
GSIRALLERE GRGKGRVLLA PRIDTGARLD IALPGGFNVS PRLAQAMKMI RGVAEVAEL