Gene Acry_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1539 
Symbol 
ID5160995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1701085 
End bp1701756 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID640553454 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001234666 
Protein GI148260539 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.382635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCACCG CGCGGCGGCA GGACCGGCTC GATTCGCTGG CCGCCGAATG CCGCCTGTTC 
GGCGTCACCG CCGAAACCGC CGCCGTCGAC CTCGCCGACG AGGCCGGCCG CCTCGCCCTG 
GCCAAGCGTT TCCCGACCAT CGACATTCTG GTGAACAATG CCGGGCTCGG CGTCTTCGGC 
GCCTTCGCCG AAGCCGAATG GGCGCGAACC GAGGCGATGC TCGCGGTCAA CATCACCGCC 
CTGACCCATC TCACCCGGCT GTTCGCCACC CCCATGGCCG CGCGTGGCTG GGGCCGGATC 
ATGATGGTCG CCTCCACCGC CGCCTTCCAG CCGGTGCCGC TCTACGCCGC CTATGCCGCG 
ACCAAATCCT ATGTCCTCTC GCTCGGCGAA TCGCTGAATG TCGAGTTGTC CGGGCGCGGC 
GTGCGCACCA CGGTGCTCTG CCCCGGCGTC ACCGAAACCG AGTTCTTCGA CGCCGCCGGC 
CAGACCCGCT CCACCTTCAC CAGGCGCAGC GCGATGACCA GCGCCGAGGT CGCGCGGATC 
GGCATCGCGG CGCTGCTCGC CGGGCGCTCC AGCGTCGTCG CCGGGCGGAG CAACGCGGCG 
ATGGCCTTCG GCACCCGCTT CGCGCCCCGC GGCCTCGCCG CCCGCCTCGC CTTCCGGATG 
ATGAAGCCGT GA
 
Protein sequence
MLTARRQDRL DSLAAECRLF GVTAETAAVD LADEAGRLAL AKRFPTIDIL VNNAGLGVFG 
AFAEAEWART EAMLAVNITA LTHLTRLFAT PMAARGWGRI MMVASTAAFQ PVPLYAAYAA 
TKSYVLSLGE SLNVELSGRG VRTTVLCPGV TETEFFDAAG QTRSTFTRRS AMTSAEVARI 
GIAALLAGRS SVVAGRSNAA MAFGTRFAPR GLAARLAFRM MKP