| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1239 |
|---|
| Symbol | |
|---|
| ID | 5160123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1379972 |
|---|
| End bp | 1380799 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640553153 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001234369 |
|---|
| Protein GI | 148260242 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGA AGACGGTCGA GATCGGCGAG CTGCGCGTCG GCAACGACCT GCCCTTCACC
CTCATCGCCG GCCCCTGCCA GATCGAGAGC GCGGAGCATG CGGGCGAGGT CGCCGGCGCG
CTCGCGGCGA TGACGCGCGA ACTCGGCATC GGCCTGATCT TCAAGTCGAG CTACGACAAG
GCCAACCGCA CCTCGCTCAC CGCCGGCCGC GGCGTCGGCA TGGCGCAGGG GTTGCAGATC
CTCGCCGATA TCCGGGCGAA ATTCGGCATC CCCGTGCTGA CCGACGTGCA CGACGCCGCC
CAGTGCGCCC CCGCCGCCGA GGCGGTGGAC GTGCTGCAGA TCCCCGCCTT CCTCTGCCGC
CAGACCGACC TGCTGCTCGC CGCCGGCCAT ACCGGGCGGG CGATCAACGT CAAGAAGGGC
CAGTTCCTGG CGCCGTGGGA CATGCGCAAC GTCGCCGCCA AGATCGCCAG CACCGGCAAC
GAGCGCATCC TGCTCACCGA GCGCGGCGCC TCCTTCGGCT ACAACACCCT GGTCTCCGAC
CTGCGCGCCT TGCCGATCAT GGCGCAGACC GGCTACCCGG TGGTGTTCGA CGCGACCCAT
TCGGTCCAGC AGCCCGGCGG CCAGGGCACC GCCTCGGGCG GCCAGCGCGA ATTCGCCCCG
ATCCTCGCCC GCGCGGCGCT CGCGGTCGGC TGCGCCGCGG TCTTCATCGA GTGCCATCCC
GACCCCGACC ACGCACCCTC CGACGGGCCG AACATGATCA GGCTGGCGGA GATGCCCGCC
CTGCTCGCGC GGCTGCAACA GTTCGACCGT CTCGCCAAAT CCGCCTGA
|
|---|
| Protein sequence | MIMKTVEIGE LRVGNDLPFT LIAGPCQIES AEHAGEVAGA LAAMTRELGI GLIFKSSYDK
ANRTSLTAGR GVGMAQGLQI LADIRAKFGI PVLTDVHDAA QCAPAAEAVD VLQIPAFLCR
QTDLLLAAGH TGRAINVKKG QFLAPWDMRN VAAKIASTGN ERILLTERGA SFGYNTLVSD
LRALPIMAQT GYPVVFDATH SVQQPGGQGT ASGGQREFAP ILARAALAVG CAAVFIECHP
DPDHAPSDGP NMIRLAEMPA LLARLQQFDR LAKSA
|
|---|
| |