| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1090 |
|---|
| Symbol | |
|---|
| ID | 5161276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1214603 |
|---|
| End bp | 1216198 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640553007 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_001234224 |
|---|
| Protein GI | 148260097 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.198066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATC AGCAGACGAT TGGCACGATG AGCGAAACGA TCGCCGCGAA GGGCGCCGCC
TGGGAGGGCA TCTCGCCCGA GGCCGTGGCC CGCATGCGGC TGCAGAACCG GTTCCAGACC
GGGCTCGACA TCGCCCGCCA CACCGCGAAG GTCATGCGCC AGGACATGGC CGCCTTCGAT
GCCGATCCCT CGCGCTACAC CCAGTCGCTC GGCTGCTGGC ACGGCTTCAT CGCCCAGCAG
AAGATGATCG CGATCAAGAA GCATTTCGGC ACCACCAAGG GCCGCTACAT CTACCTCTCC
GGCTGGATGG TCGCGGCGAT GCGCTCCGAG TTCGGCCCGC TGCCCGACCA GTCGATGCAT
GAAAAGACCT CGGTGCCGGC GCTGATCGAG GAGATCTACA CCTTCCTCCG CCAGGCCGAC
GCCCGCGAGC TCGGCCTGCT CTTCCGCGAG CTCGACGCCG CCCGCGAGGC CGGCGACCTC
GCGAAGCAGA AGGAGGTGCA GACCCGGATC GACAATTTCG AAACCCATGT CGTGCCGATC
ATCGCCGATA TCGACGCCGG CTTCGGCAAT GCCGAGGCGA CCTACCTGCT GGCCAAGAAG
ATGATCGAGG CCGGCGCCTG CGCGCTGCAG ATCGAGAACC AGGTGTCCGA CGAGAAGCAG
TGCGGCCACC AGGACGGCAA GGTGACCGTC CCGCACGAGG ATTTCGTCCA GAAGATCCGC
GCCCTGCGCT ACGCCTTCAT GGAGCTCGGC GTCGAGGACG GCGTGATCGT CGCCCGCACC
GACTCGCTCG GCGCCGGCCT GACCAAGCAG ATCGCCTATT CGAAGGAGCC GGGCGACATC
GGCGACCAGT ACAATTCCTT CCTCGACTGC GACGAGGTCG ATCCCGCGCA GATCGGCAAC
GGCGACGTGC TGATCACCCG CAACGGCAAG CTGCTGCGCC CGAAGCGCCT GCCCTCCAAC
CTCTACCAGT TCCGTCCCGG CACCGGGGCC GACCGCTGCG TGCTCGACTG CATCAACGCC
CTGAACAACG GCGCCGACCT GATCTGGATC GAGACCGAGA AGCCCCATAT CGAGCAGATC
GCCTCGATGG TCGATCGCGT GCGCGAGGTC ATCCCGAACG CCAAGCTCGC CTACAACAAC
TCGCCCTCCT TCAACTGGAC GCTGAACTTC CGCCAGCAGG TCTTCGATGC CTGGAAGGAG
CAGGGCAGGG ACGTCTCGGC CTTCGACCGC GCCCGGCTGA TGAGCGCCGA CTACGACGCG
TCCGACCTCG CGGCCGAGGC CGATGAGCGC ATCCGCACCT TCCAGCGCGA CGCCGCGCGG
CGGGCGAACA TCTTCCACCA CCTCATCACC CTGCCGACCT ACCACACCGC GGCGCTGTCG
ACCGACAATC TCGCGAAGGA GTATTTCGGC GAGCAGGGCA TGCTCGGCTA TGTCGCCGGC
GTGCAGCGCA AGGAAATCCG CCAGGCCATC GCCTGCGTGA AGCACCAGAA CATGGCCGGC
TCCGACATCG GCGACGATCA CAAGGAGTAT TTCGCCGGCG ATGCCGCGCT GAAGGCCGGC
GGCGCCCACA ACACGATGAA CCAGTTCGCG GCCTGA
|
|---|
| Protein sequence | MTYQQTIGTM SETIAAKGAA WEGISPEAVA RMRLQNRFQT GLDIARHTAK VMRQDMAAFD
ADPSRYTQSL GCWHGFIAQQ KMIAIKKHFG TTKGRYIYLS GWMVAAMRSE FGPLPDQSMH
EKTSVPALIE EIYTFLRQAD ARELGLLFRE LDAAREAGDL AKQKEVQTRI DNFETHVVPI
IADIDAGFGN AEATYLLAKK MIEAGACALQ IENQVSDEKQ CGHQDGKVTV PHEDFVQKIR
ALRYAFMELG VEDGVIVART DSLGAGLTKQ IAYSKEPGDI GDQYNSFLDC DEVDPAQIGN
GDVLITRNGK LLRPKRLPSN LYQFRPGTGA DRCVLDCINA LNNGADLIWI ETEKPHIEQI
ASMVDRVREV IPNAKLAYNN SPSFNWTLNF RQQVFDAWKE QGRDVSAFDR ARLMSADYDA
SDLAAEADER IRTFQRDAAR RANIFHHLIT LPTYHTAALS TDNLAKEYFG EQGMLGYVAG
VQRKEIRQAI ACVKHQNMAG SDIGDDHKEY FAGDAALKAG GAHNTMNQFA A
|
|---|
| |