Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0684 |
Symbol | |
ID | 5160878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 770738 |
End bp | 771490 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640552598 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001233824 |
Protein GI | 148259697 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.990924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAT ACGCCATTCT GGCCATCGTT CTCGCGCTGG CGGCCGAGTT CGCCAAGTGG CGCGAGATCG GACGCACCTT CTTCGAGCCG CGGCTGATCG AATTCACGAT TCTCCATGGC CTCGCCAACG CGCTGCTGAA CACCGCGCTC TATACGGCCG GCGCGTTCGT GCTCGGCCTC GTGCTCGGCC TCGTGCTGGC GCTGATGCGG CTGTCCCCGG TCGCGCCCTA TCGCTGGCTG GCGACGGTCT ATATCGAATT CTTCCGCGGC CTGCCCTCGC TTGTCGTGTT CATCGCGTTT TCGCTGCTGC CGCTGGCCTT TTCCGGACTG ACGATCCCGT GGTCGCCCTA CGGCACGGTC TGGGTCGCGC TCGGCGTCGT CGGCAGCGCC TACATGGCGG AGACGATGCG CGCCGGCATC CAGGCCGTGC CCAAAGGCCA GGTCGAGGCG GCGCGCTCGC TCGGCATGTC CTCGGCGCAG GCGATGCGCA AGATCGTGCT GATGCAGGCG CTGCGGCTCA TGGTGCCGCC GCTGACGAAC GAGCTGATCA TGCTCATCAA GGATTCGTCG CTGGTGTTCG TGGTCGGGCT GTCGGCCGGG CAGTTCGATC TGACGGAATT CGGGCGGTCC ACGGCCAATA CCAACGTCAA CATCACGCCG CTCGTGGTGG CCGGGCTCGG CTACCTGCTG ATCACGCTGC CGCTGTCGAT GCTGGTGCGG CGGATGGAGG TATCGCGGGT GACGGGAGCA TGA
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Protein sequence | MAQYAILAIV LALAAEFAKW REIGRTFFEP RLIEFTILHG LANALLNTAL YTAGAFVLGL VLGLVLALMR LSPVAPYRWL ATVYIEFFRG LPSLVVFIAF SLLPLAFSGL TIPWSPYGTV WVALGVVGSA YMAETMRAGI QAVPKGQVEA ARSLGMSSAQ AMRKIVLMQA LRLMVPPLTN ELIMLIKDSS LVFVVGLSAG QFDLTEFGRS TANTNVNITP LVVAGLGYLL ITLPLSMLVR RMEVSRVTGA
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