| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0539 |
|---|
| Symbol | |
|---|
| ID | 5159761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 601751 |
|---|
| End bp | 602827 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640552455 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001233682 |
|---|
| Protein GI | 148259555 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAC TCATGGGGAA GATCGCGGGA GGTGCGCTTG CCGCGCTCAT CGCGATCGGC
GGTGGCGCGC CGGCCGCGCA TGCCGCGGGC AAGACGCTCT ACCTGTTCAA CTGGCAGGAC
TATATCGGCA AGGGCCTGAT CAAGAAGTTC GAGGCCTATT GCGGCTGCAA TGTCGTGCAG
ACGTACTACG ATTCGAATTC CGAACTCGAC GCGAAGCTGC GTGCCGGCGG CGACTCGCAG
TATGACGTGG TCGTCCCGTC GAGCTACTAC ATTCCGCAGC TCGTCCAGCA GGGGCTGATC
CGCAAGCTCG ACAAGTCCAA ACTGCCGAAC TTCAAGAATT TGCTGCCGCG CTTCCAGAAC
GTCAGCTACG ATCCGCACGA CACTCACGTC GTCCCCTATC AGTGGGGCAC GATCGTGATC
GGCTACAACA AGGACAAGAT CAAGAACCCG CCCGAGAGCT GGGCAGCACT GTTCGACCCG
AAATACAACG CGAGCTACCC GTTCTCGATG ATGAAGGGTT CGGGGCGCGA TCTGATCGGG
GCGGCCTGCG CCTATCTCGG CGAGGGCTTC GCCTGCAAGA CCAAGGCCGC CTGGATCAAG
GCGGCGAAAC TGATCGAGAA GCAGGTCAAG CGGCCGAACT TCTCCGGCTT CGTCGATGGC
GATCCGACGA TGCAGCAGCT CAAGAAGGGC GTCGTCGCGA TCGGGATGAC CTGGAGCGGC
AGCGTCGCGC AGTGCTATGC TGACAAGACC TGCCTCAATA TCGGCTGGAT CCTGCCCAAG
GAAGGCTCGG AGGCCTGGGT GGACAACATG GCGATCCCGA CCCACGCACC GAATCCCGAG
CTCGCCTACA AGTTCATCAA CTTCATCCTC GGCGCCAAGG AGGGGGCGGA GCTGTCGAAC
TTCAACATGT ATCCGAGCCC GAATGCGGCC TCGGAGCCGT ATCTCGACAA GGCCATCAAG
CAGCCGCTGG TCACGCCGAC CGCGGCGCAG ATGAAGCGGC TCAGCTTCCT TCCCGCGCTG
ACGCCGGCGC AGGCCAAGGA ATTCGGTGCG ATCTGGACCG CGGTCCGCCA GCACTGA
|
|---|
| Protein sequence | MKGLMGKIAG GALAALIAIG GGAPAAHAAG KTLYLFNWQD YIGKGLIKKF EAYCGCNVVQ
TYYDSNSELD AKLRAGGDSQ YDVVVPSSYY IPQLVQQGLI RKLDKSKLPN FKNLLPRFQN
VSYDPHDTHV VPYQWGTIVI GYNKDKIKNP PESWAALFDP KYNASYPFSM MKGSGRDLIG
AACAYLGEGF ACKTKAAWIK AAKLIEKQVK RPNFSGFVDG DPTMQQLKKG VVAIGMTWSG
SVAQCYADKT CLNIGWILPK EGSEAWVDNM AIPTHAPNPE LAYKFINFIL GAKEGAELSN
FNMYPSPNAA SEPYLDKAIK QPLVTPTAAQ MKRLSFLPAL TPAQAKEFGA IWTAVRQH
|
|---|
| |