Gene Acry_0104 details

Gene Information

• Locus tag: Acry_0104
• ID: 5161832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 114138
• End bp: 114929
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640552020
• Product: TPR repeat-containing protein
• Protein accession: YP_001233251
• Protein GI: 148259124

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATC TCCACTCGAA TTCTCAATTG CAACCTGCCG TGCGGGGCGA CAATTCAAGT 
GTAAATCGCG TGCTTTTTGC GCGCGTGCGG CAGTTAATCG ATCAGGGGCA GGTCAACGCT 
GCCTCGCTCC TACTCCCTAC CCTCGAGAAG CGCGGTGAGA ATCCTGGGAC GATCGTTGCG 
CTGTCAGCGG CAATCGAATT TGTCAAAGGC AGGCACGCTC GTGCAAAGGA AATAGTGTCG 
GACGGCTTAG CTGCATTTCC TGAGAATTCG ATTATTCTTT GTTTTAGTGC CGAGATTAGC 
CTTGAGGAAA AGAATTGGGT TGAAGCGGCG AAGGCCGCTT CCGAGGCGGT CGTTGCAGAC 
CCAAGGAATT CAACGGCTAA GTCGATATTA GGAAGAGCTC TCTTGGAGCT AGGGCATATC 
GACGACGCTG CGACCTGCTT GCGTGAGGTC CTTGACGAGA TGCCTGCTAA CTTCCTTGCG 
CTCGCCGGGC TATGCCGCTC TGCGCCGGCG GAGGCGGAGG ACACCTTGCG CAATATATTG 
CGGGACGGTG ATGAAGAGCA TTCCGACCGT CCTCAAGATG ACCTGAGGCT TCGCCATCTT 
CTTATCTCGG TACTGATTGA ACGGGGAGCC TATACAGAGG CAACTGACCA AATCCGGCGA 
CTTGTAGCCG AAGGTCGCGC TGATCTCGAC ACGAGTCTCC TAGCCGTCCA AGCAGCCGTA 
GGAACAGGAA ATTGGGACGA GGCCACATTG CTGTTTAGCG ACAATACGCG CAGTTTGCCA 
CGCCATGCTT GA 

 

Protein sequence

MSDLHSNSQL QPAVRGDNSS VNRVLFARVR QLIDQGQVNA ASLLLPTLEK RGENPGTIVA 
LSAAIEFVKG RHARAKEIVS DGLAAFPENS IILCFSAEIS LEEKNWVEAA KAASEAVVAD 
PRNSTAKSIL GRALLELGHI DDAATCLREV LDEMPANFLA LAGLCRSAPA EAEDTLRNIL 
RDGDEEHSDR PQDDLRLRHL LISVLIERGA YTEATDQIRR LVAEGRADLD TSLLAVQAAV 
GTGNWDEATL LFSDNTRSLP RHA